Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03195 ATGGAATGTAATTATCAGTGTGGCCAGAGTGTTGCAAGCTTGAAGAGAAAGTCGCGAGAAGATGAAAACGATATACTCTTCAACACCTTTTCTCTGGATGACCTTAATGAGGATCTCTTTGAAAGGATACTTTCATGGCTTCCAACTTCCACATTCTTTCGCCTGAATTCTGTGTGCAAAAGATGGAAATCGGTTGCTGATTCTGCAAGTTTCAAGCTTGCCTGCTCTCACATTCCCTCGAGGGATCCTTGGTTTTTAATGGTTGCGCCCAACCTTAATCAATCTGTTATCTTTGATTCTGCTGAGAGCGCTTGGAAGAGACTAAACCACCCACCTCTTCTGCAAGAAGAATGTAACCAAAATTGCATGCCGGTTGCAGCCTCTGGTGGCTTGATTTGCCACCGGAAATTATCAGGAAACTTCATTGTGAGCAACCCCGTGACAGGATCTTGTACAGAACTTCCCCCAATTCGTGCCCCGCAGCATCAACCTCTCAATGCCATTGTGATGAGCACAGCTTGCAAAGACCAACTTTCCTTCAAAATTGTCTTAGTCTTTGGTGAACTTCCAAATCTCTTGTTCAAAGTCTACGATTCAAGATCTGGCTGTTGGGATGCTGAGATTGCTCTGAGGAGAAAGACAGAAGACAGTTCAATGGAACATGATTCTACTGATGACAACGTTGTGTACTTCCTCAGCAAAGCTGGAATTGTTGTGGCAAGCAACATGCAGAGAAGCCCCTCTAAGCAATATTCATCGGTTATTACCAACAAAGATGGCCAAGACATTGTGTACTTTGTTAGCTCCTCAGGGAACGTGGTAGCTTGCAATTTGACATGCAAGTGCTTCTCTGAGTATCCTAGGTTGTTACCTGTTTTTAGTGAGTATTCCATTGATGTTGTAGAGTGCAATGGGGAGATGGTAGTTGTTTTGTTATCAGAATTCTTGGAGAGTGCAACTCTTAGAGTGTGGAAATATGATGAGGCTAATAGAGGGTGGCATCAGATTGCGGCAATGCCTGCAGCAGATTCTCATGTGTGGTATGGAAAGAAAGCAGACATCAATTGTGTTGGAGCTGGAAACCAAATACTGATATGCTTGAACTCCTCTGATCTATGCACTTATATTCTGTGTGATTTGGAAACCAATAAATGGGTTGAATTGCCAAAATGTTGCATAAATGGAGAAGTCATAGACTTTATGTCTGCATTTTCATTCGAGCCTCGGATAGAGGCTTCTCTATGA 1245 0.4289 MECNYQCGQSVASLKRKSREDENDILFNTFSLDDLNEDLFERILSWLPTSTFFRLNSVCKRWKSVADSASFKLACSHIPSRDPWFLMVAPNLNQSVIFDSAESAWKRLNHPPLLQEECNQNCMPVAASGGLICHRKLSGNFIVSNPVTGSCTELPPIRAPQHQPLNAIVMSTACKDQLSFKIVLVFGELPNLLFKVYDSRSGCWDAEIALRRKTEDSSMEHDSTDDNVVYFLSKAGIVVASNMQRSPSKQYSSVITNKDGQDIVYFVSSSGNVVACNLTCKCFSEYPRLLPVFSEYSIDVVECNGEMVVVLLSEFLESATLRVWKYDEANRGWHQIAAMPAADSHVWYGKKADINCVGAGNQILICLNSSDLCTYILCDLETNKWVELPKCCINGEVIDFMSAFSFEPRIEASL 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03195 414 CDD F-box_AtFBW1-like 33 71 - -
Viun9g03195 414 PANTHER BNACNNG10540D PROTEIN 17 413 - -
Viun9g03195 414 SUPERFAMILY F-box domain 28 87 IPR036047 GO:0005515
Viun9g03195 414 Gene3D - 82 399 IPR015915 GO:0005515
Viun9g03195 414 SMART fbox_2 35 75 IPR001810 GO:0005515
Viun9g03195 414 SUPERFAMILY Galactose oxidase, central domain 95 392 IPR011043 -
Viun9g03195 414 Gene3D - 28 81 - -
Viun9g03195 414 ProSiteProfiles F-box domain profile. 29 74 IPR001810 GO:0005515
Viun9g03195 414 Pfam F-box domain 32 71 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03195 Viun-Chr9 39177740 39180747 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03195 - - gmx:100786481 728.398