Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03190 ATGAACAACTTTCTGGTTGCAGCTGCACAAGATGGGGACGTAGACTTGCTCTACAAGCTGATTCAGATGCAACCCTATGTGCTGGAACACACCGACTTCATGCCATTTGTTGACACTCCTCTGCATGTTGCAGCTGCTGCAGGCCATGCCAGTTTTTGCACTGAGCTCATCAGACTCAAACCCTCCTTTTCATGGAAGCTCAACCAGTGTGGGCTCAGCCCCATGCATCTTGCGTTGCAGAAGAAGCATCACAGATTGGTGTGTCGCTTTGTGGAGATCAACAAGGACCTCGTGAGGATCAAAGGGAGAGAGGGTCTCACTCCTTTGCATCTTGCAACTCAAACTGGGACCATTGATCTTCTGCCCAAGTTCTTATCGGCTTGTCCTGATTCCATCGAAGATGTAACTGTTCGAAGTGAAACCTCGCTGCATATTGCTGTCAAATATAACCAGTTTCAGGCTTTGGAGGTCTTGGTTGGATGGCTTCAGAGAAACTGCCAGAGACACGCTCAGAACCGCGAGCGCAGGATTCTCAACTGGCGGGATGAAGCAGGCAACACCGTTCTCCACCTTTCCGTTCTCAAAGTCTTCCCTCAGGCAGTTAAGTTGTTGTTAGAAAGCAACATAGACATAAATGCAAAGAACTTCGAGGACTTAACAGCGTTGGACATAGTTGAGATTAACCAAACCGAGGCTCACAGTGCAGAGATCAGAGACATGTTAGTGAGGCGTGGAGCTTTACGTGGCTTTTCGATTGCTACCACAACACTGGTGGAAGAGCTACGAGCAAAAATCACATTCAACGAGAGAATAGCGATCTCGGTGACTCGTCTGAGAAAGAGAATATCAAACGACACACGCAACGCATTGTTGGTGGTGGCTATTCTTTTCGCGACAAACACTTACGAAGCAGTGCGTAGCCCTCCCGGTGGAGTTTACCAAGCAGAGGGTAGTTCTAATAACAAGATCAGCACATCGTTCCAGCACAGTGAGTATGCAGCAATGCAAGAAATTGCTGGGAAAGTGGTGATGAAAATGCAGATCTTCAACTGGTTCTGGTCCTTCAACACATTCTCCTGTTATCTTTCCATTTTGATGATATGTTTTCTGATGCCACGAGGGCGAATCAGTGTTTTCGTGACCTTTCCGCTTTCTATATTTTCTGGATGCTACGTCTTCTCCATGTTAGTGATATCACCCAGTTTCAGGTTAAACACTGCCACTGTGGTTCTGCCATGCGTGTTCACGCTGTTCTACGGTTGGGGGAGTTACGTATACATTAGATTAGCCAAAAAACTTAAAATGTACGCACATAAACAGAAAGACACGTTCAAGTTTGTGGGAGGAAATAGATGGTAA 1359 0.465 MNNFLVAAAQDGDVDLLYKLIQMQPYVLEHTDFMPFVDTPLHVAAAAGHASFCTELIRLKPSFSWKLNQCGLSPMHLALQKKHHRLVCRFVEINKDLVRIKGREGLTPLHLATQTGTIDLLPKFLSACPDSIEDVTVRSETSLHIAVKYNQFQALEVLVGWLQRNCQRHAQNRERRILNWRDEAGNTVLHLSVLKVFPQAVKLLLESNIDINAKNFEDLTALDIVEINQTEAHSAEIRDMLVRRGALRGFSIATTTLVEELRAKITFNERIAISVTRLRKRISNDTRNALLVVAILFATNTYEAVRSPPGGVYQAEGSSNNKISTSFQHSEYAAMQEIAGKVVMKMQIFNWFWSFNTFSCYLSILMICFLMPRGRISVFVTFPLSIFSGCYVFSMLVISPSFRLNTATVVLPCVFTLFYGWGSYVYIRLAKKLKMYAHKQKDTFKFVGGNRW 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03190 452 PRINTS Ankyrin repeat signature 105 120 IPR002110 GO:0005515
Viun9g03190 452 PRINTS Ankyrin repeat signature 200 214 IPR002110 GO:0005515
Viun9g03190 452 Pfam Domain of unknown function 284 402 IPR026961 -
Viun9g03190 452 ProSiteProfiles Ankyrin repeat region circular profile. 184 215 - -
Viun9g03190 452 SMART ANK_2a 36 65 IPR002110 GO:0005515
Viun9g03190 452 SMART ANK_2a 138 170 IPR002110 GO:0005515
Viun9g03190 452 SMART ANK_2a 104 134 IPR002110 GO:0005515
Viun9g03190 452 SMART ANK_2a 70 99 IPR002110 GO:0005515
Viun9g03190 452 SMART ANK_2a 184 213 IPR002110 GO:0005515
Viun9g03190 452 ProSiteProfiles Ankyrin repeat profile. 104 125 IPR002110 GO:0005515
Viun9g03190 452 SUPERFAMILY Ankyrin repeat 4 243 IPR036770 -
Viun9g03190 452 ProSiteProfiles Ankyrin repeat profile. 184 216 IPR002110 GO:0005515
Viun9g03190 452 Pfam Ankyrin repeats (3 copies) 7 92 IPR002110 GO:0005515
Viun9g03190 452 Pfam Ankyrin repeats (many copies) 176 224 IPR002110 GO:0005515
Viun9g03190 452 Gene3D - 1 256 IPR036770 -
Viun9g03190 452 ProSiteProfiles Ankyrin repeat region circular profile. 104 126 - -
Viun9g03190 452 PANTHER HOMEOBOX PROTEIN WARIAI 11 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03190 Viun-Chr9 39147727 39149722 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03190 5 420 Miscellaneous Gene Families AT5G15500 41.135 2.22e-92 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03190 - - gmx:100790227 719.539