Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03179 ATGGCGTTGGTGAATCCCTTCGTGTCTCCCACTCGAACTTTCCTCCCTTTGCGCGTTTCCGCGCCGCCAAACAAGGGACTACGTTGGACTCTCTACTCCCCTTCCTTCAAACCATCGCTAAGATCCAAGCACGTCACGTGTGGCGCCACTGCGGACATCAAAGCTGCACCTTTAGCTGACAGCGAAGCAGATGGCGCAGTTCTTGAGGTTCCAACCAGCGAGGAGGAGGTAAAGGTGGAGTATAACTGGACGGAGGAATGGTACCCTTTGTATCTCACTAAGAATGTTCCCGAAGATGCACCCTTGGGGCTCACAGTGTTTGATAAACAACTCGTGTTGTTCAAGGATGGCAATGGCCAGTTACACTGTTACGAAGATCGCTGCCCCCACAGGTTAGCCAAACTGTCAGAGGGACAGTTGGTTGATGGAAGGCTTGAGTGTCTATACCATGGATGGCAATTTGAAGGGGAGGGCAAATGTGTGAAGATACCACAGCTTCCAGCTGATGCCAAAATCCCTAGGACAGCTTGTGTTAAAACATATGAAGTGAGGGACTCTCAAGGTGTAATTTGGGTGTGGTTGTCCCTCAAAACACCTCCAAATGATAGTAAACTACCTTGGTTTGAGAACTTTGCAAGGCCGGGATTCACAGACATTTCAACAATTCATGAACTCCCTTACGATCACTCTATTCTCCTGGAGAACCTGATGGATCCTGCTCATGTCCCTATCTCACATGACAGAACGGATTGGACCGCAAAAAGGGAGAATGCTCGGCCACTGAGTTTTGAGGTGACTGAACGAACTGATAGAGGGTTTGCAGGTTGGTGGGGTGCTGAGAAAGATGGGTCCAAGCCTAACTTCTTGAGGTTTGAGGCTCCGTGTGTTCTACAAAATAACAGGGAATTTGCTGATAAGAGTGGTGTAACAAACTACTTCACTGGCCTGTTCCTCTGTAGACCAACTGGGCAAGGGAAATCCATGCTTATAGTGAGGTTTGGATCAACAAGATCATCATCTCTGCTAGTAAAACTGTTTCCTAAATGGTACTTCCATCAAAATGCATCCACGGTTTTTGACCAAGACATGGGATTCTTATCATCTCAGAATGAAATTCTCTTGAAAGAGAAGGTTCCAACAAAGCACCTTTATCTGAATCTGAAGTCATCAGACACATGGGTTGCTGAATACAGGAAGTGGATGGACAAAGTGGGGCATGGGATGCCATATCATTTTGGTCACAGCACTATCTCTTTGCCCAAACAACCTGCTGTGGTTGAACATGCACCTGCTGGACTCGTTGCAGGACAATCAGCTTCCTCACCTGCCAAAGGGGGCATTGGATCAATTCATGCTCCAAATTTAGCCAACAGATATTTTAGGCATGTCATACATTGCAAAGAATGTAGAACCGCAGTGAAAGCTTTCCAAGCTTGGAAAAATGCCCTTTCAGCTGTGGCAGTTACATTAATCGCTTTGGCAATTCTTGTATCTGGGAAACAGTGGAAGGCCATTCTCTTGGCATCTGCTTCCCTGTGCTCTATTGGAGTCTATGCTTGCTCAAGAGCCATTGCGATGAACACCACAAACTTTGTTAGGACACATAGGAGATTGTGA 1617 0.4675 MALVNPFVSPTRTFLPLRVSAPPNKGLRWTLYSPSFKPSLRSKHVTCGATADIKAAPLADSEADGAVLEVPTSEEEVKVEYNWTEEWYPLYLTKNVPEDAPLGLTVFDKQLVLFKDGNGQLHCYEDRCPHRLAKLSEGQLVDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRTACVKTYEVRDSQGVIWVWLSLKTPPNDSKLPWFENFARPGFTDISTIHELPYDHSILLENLMDPAHVPISHDRTDWTAKRENARPLSFEVTERTDRGFAGWWGAEKDGSKPNFLRFEAPCVLQNNREFADKSGVTNYFTGLFLCRPTGQGKSMLIVRFGSTRSSSLLVKLFPKWYFHQNASTVFDQDMGFLSSQNEILLKEKVPTKHLYLNLKSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKQPAVVEHAPAGLVAGQSASSPAKGGIGSIHAPNLANRYFRHVIHCKECRTAVKAFQAWKNALSAVAVTLIALAILVSGKQWKAILLASASLCSIGVYACSRAIAMNTTNFVRTHRRL 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03179 538 Gene3D - 81 211 IPR036922 GO:0051537
Viun9g03179 538 Gene3D - 214 406 - -
Viun9g03179 538 ProSiteProfiles Rieske [2Fe-2S] iron-sulfur domain profile. 87 192 IPR017941 GO:0051537
Viun9g03179 538 Pfam Rieske [2Fe-2S] domain 86 168 IPR017941 GO:0051537
Viun9g03179 538 Pfam Pheophorbide a oxygenase 291 377 IPR013626 GO:0010277
Viun9g03179 538 SUPERFAMILY ISP domain 76 200 IPR036922 GO:0051537
Viun9g03179 538 PANTHER IRON-SULFUR DOMAIN CONTAINING PROTEIN 50 486 - -
Viun9g03179 538 SUPERFAMILY Bet v1-like 188 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03179 Viun-Chr9 39078170 39080310 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03179 - - pvu:PHAVU_009G086000g 1002.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03179 9 39078170 39080310 Viun9g03179 9 39078170 39080310 ECH