Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03165 ATGGTATCTCAGTCACTATCGAAAACCATGAGACACACTCCCAGGATTCGTGTCCGTTGTGTCTTTGTGTGTTATATATTGATTTTGTTGAACAGTGTTTATGCATCAGCATCATCTTCTTCTCGCTGCAAAGCATGGTTAGTGCAATCCATTCCCACGAATATGCCCCACCTACCCAATGTTCCTGGCACCCTCTCTACTGGGGATGTGCTTCGGTGGCTGGCTGCAAACTCCACCACGAGGCTTCACATAATTGCTCAATACTGGCAGCTTCTACCTTCCCCCAACGATCCTCGATCTGGGGACTATGGTTACACTCAACGTCAGATGCATGAATTCGGTGCCAGTGAAGGTGTTTCTCTTTATCAAGAATTAGACGCTGCTGCTGACCGGAATGTTAGCATCAGGCTACTGTCCCACTCTGGAGTATATCCAACTTTTACCTCAGAACCATCCAAACTTGCTTTCGGAAGGCCAAATGTTGAGAATGTGACATTGCTGCTGGAGGATTGGTGGGGCTCTGGCATTGTCCATGCCAAAGTTTGGATATCTGATAGTAGGGATGTGTATATTGGATCTGCAAACAATGACTGGAAATCTCTCACACAGGTCAAGGAACTCGGAATTTACTTTACTAATTGTCCTGAAATAGCTAAAAAGGTTGAGGTGTACTTTGACAATTTGTGGACACTAGCATCCCTCAACTCTTCAGCTTACACGAAAACAGTGTTTGATCAAGAGTGGCAAGTTGAGAGGAAGTTTCCTTGCTGGTCACATTTCATTGATCATAAAGAGAGGTGCAAGTCACCTCTTCCTCGATATCTGAAGACTCCTCATGTTGCAGGATATCCTATTCTGTCTGACCCTTACATGTTTGTGGTTTCATTTCAAACCCCTGGGAATAACTATTCAACAAACCTCCCCCAAGCCAGCTATCTATCCTTTGCACCCCCAGAGCTATTATTTGGAAAATATCAAGCTGATGAGCAGGCATGGATTGATACAATCAAGTCTGTTGGAGATAAGCAGACAGTTAGAATCAGTACAATGGACTGGTTGGGTCAGTCACAATTTATGGACCAAACAATTTTCTGGTCATCCTTATCCTCTGCAATATCAGAGGTGGTGTTTTCGAAGAATGCAACAGTACAACTATTGGTGGCATATTGGGGACACTCCATCAGTAACACGGATGTGTACCTGAAGTCTCTCCTCTACACCAACAATCTCTGCTCTTCCTCAAAGTACAACAAATGCTTTGGGAAAGTTGAGATAAAATATTATGTGGTTCCTGGTTTCAACATGACAGGACCTGCTATTCATGGAGGAAGTAAAACAGGAAACAAATACCCTGATTTTACAAGAGTGAATCATGGAAAATATGCAGTTAGTGATGTAAGGGCACACATTGGGACTAGCAACCTTGTATGGGACTACTTCTACACAACAGCAGGTGTCAGCTTTGGGACATACAACACTGCCATCGTCTCTCAACTTAGGGAAATTTTTAATGCTGATTGGAACTCACCCTATGCTGTTCCACTAGAAGAACTGGAGAAAGGTCACAAAAGTTCAATTTAA 1581 0.4333 MVSQSLSKTMRHTPRIRVRCVFVCYILILLNSVYASASSSSRCKAWLVQSIPTNMPHLPNVPGTLSTGDVLRWLAANSTTRLHIIAQYWQLLPSPNDPRSGDYGYTQRQMHEFGASEGVSLYQELDAAADRNVSIRLLSHSGVYPTFTSEPSKLAFGRPNVENVTLLLEDWWGSGIVHAKVWISDSRDVYIGSANNDWKSLTQVKELGIYFTNCPEIAKKVEVYFDNLWTLASLNSSAYTKTVFDQEWQVERKFPCWSHFIDHKERCKSPLPRYLKTPHVAGYPILSDPYMFVVSFQTPGNNYSTNLPQASYLSFAPPELLFGKYQADEQAWIDTIKSVGDKQTVRISTMDWLGQSQFMDQTIFWSSLSSAISEVVFSKNATVQLLVAYWGHSISNTDVYLKSLLYTNNLCSSSKYNKCFGKVEIKYYVVPGFNMTGPAIHGGSKTGNKYPDFTRVNHGKYAVSDVRAHIGTSNLVWDYFYTTAGVSFGTYNTAIVSQLREIFNADWNSPYAVPLEELEKGHKSSI 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03165 526 Pfam PLD-like domain 119 229 IPR025202 -
Viun9g03165 526 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 173 200 IPR001736 GO:0003824
Viun9g03165 526 Gene3D Endonuclease Chain A 316 510 - -
Viun9g03165 526 SUPERFAMILY Phospholipase D/nuclease 309 522 - -
Viun9g03165 526 SUPERFAMILY Phospholipase D/nuclease 71 231 - -
Viun9g03165 526 CDD PLDc_vPLD3_4_5_like_2 312 508 - -
Viun9g03165 526 CDD PLDc_vPLD3_4_5_like_1 47 214 - -
Viun9g03165 526 SMART pld_4 173 200 IPR001736 GO:0003824
Viun9g03165 526 SMART pld_4 453 479 IPR001736 GO:0003824
Viun9g03165 526 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 453 479 IPR001736 GO:0003824
Viun9g03165 526 PANTHER PHOSPHOLIPASE D - RELATED 38 523 - -
Viun9g03165 526 Gene3D Endonuclease Chain A 66 233 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03165 K16860 - gmx:100778897 937.562
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03165 9 39022532 39026061 Viun9g03165 9 39022532 39026061 ECH