Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03155 ATGTCTATTGATAAAGAATTGGAAGAACAACTCCTTGAAGTCGGTAACAAGCTCGCAGTTCCTCCGTCCTCAGTGGAGGAGGTCCTCCAACTCCTAGACCAAGTGGAGAGCCTCCTATTAAGGGTTGGACAAGCACCTTCATCGTCCATGGAAAATGCACTCTCTCCATCATTGAAAGCATTAATTGCAAACAAACTTTTGCAACACTCAGATGATAATGTCAAAGTTGCAGTTGGTTCTTGTATCAGCGAAATAACAAGAATCACTGCACCTGAAGCTCCTTATGATGATGATCAGATGAAGGATGTCTTTCAATTAATAGTATCGGCATTTGAAAATCTACATGATAAGCTAAGCCAATCATATGCAAAGAGGATATCAATTCTTGAAACGGTTGCAAGAGTCAGATCATGTGTGGTTATGCTGGACCTTGAATGTGATGCCCTGATTTTAGAGATGTTTTGGCATTTCTTGAAAACAATAAGGGAACATCATCCAGCAAATGTTTTTTCGTCCATGGAAACAATTATGACTCTTGTTCTAGAGGAAAGTGAAGATATATCCTTGGACTTGCTCTCTCCACTCCTGACCAGCATTAAGAAAGACCATGAGGAAGCTTGTCCAATTGCCCAAAAATTGGGGGAGAAGGTCCTTGAAAGTTGTTCAACCAAGCTTAAACCCTACTTGGTTCAAGCAGTGAAATCCTTGGGTATATCTGTGGATGATTATAGTATGGTGCTTGCTTCAATTTTTCAGGAAGTTAACAAAGATTCAAGGGAAGTTACACCCTCTCAACAAGAAAATCCTGATGGGAATATATCTCCGAAGTCTGTCATGAGCAATGGTGTTACTTGTGTTGGAGATGATAATGATTTGGACACTGAAAAAGTTGACAATAGTAAACAAAAGTCGGAACATTCTACCAAGAGACGACAAAAGAAACCAACCACTTCAACCAAATCAGCAAAACGTTCCAAGGGTGAAGTCGCTACTAATGCGAAAGAGACTGAGAATGAAAGCCACAGCAGGAAAGTTCCCTGTTCCCCTTCTGAGGACCATTCTGTTGAAGCAGCCGTATTACCAAAGGCATGCTACAACGAATCTGAAGTATTAGCTTCTCCTCCTAGTGAGAGCTTCCATGAGGAAAATCTTTCAAAGAAACTTGGACGAACAAAAATGAAAGACGGTTCTGTAAGAGAAGGAGCTGCAGAGAATGTTTCAAAGGTGTCCGGAGGAGCTAGTGATTCAGAAGCCAAACCTGCCAGGAAGTCAGTGAAAAAGGCCCATGGTCAGATCTCTGATGCGAAAAAAACTAGTGTGGTAGATTCATTAAAAAAAAGAAGTGATTCAGCAATTGATGCAGATACGGAAAAGCACTCTGCCAAGAAATTAGATAATAACAAAAAGGGCATAGGCGGATCCTCTTCAAGGCAGATGGGGGACAAGAAAAAGGGATGCTGGCGGAAAGAAATGCTTTCTTCTCCAAAGTCTGGAACAAAATCAACTAAGGATGAAAATCCAGAGACTCCCAAGACAACTGTAATGAAGCTTACATCAGGAAAAGAAAATGAGTCTGATACTGAGAAATATGGTGAAAACGTTGTTGGTTTACGGGTCAAAGTTTGGTGGCCTAAGGATCGTGAGTTTTACAAAGGTGTTATTCATTCTTTTGATTCTGCCAAAAAGAAGCACAAGGTCTTCTATGATGATGGAGATGAAGAAACATTGAATCTTGTGAAGGAAAAATGGAAGGTCATTGATGCTGACTCAGATGCAGATGAGGAGGAACAACGTGAGCCTGCAAGTCTTGATGCTTCCACTGATATGCCACCAAAGAAGAAAGGGGAAACAAGTGTTGGTGAGTCAAACAAGCAAGGAAAGACAGATCCTTCTTCTAGAAGCGATGGAGTAATTGCATCCAGTAGATCATTGGATGTATCCATGAAGTCCAGTCACAAGTCCAAAGATGGGAAGAAATCGAAAGGTTCCAACACTACTAGGAAATTAGAGGATGTAGTTAGTGTTGGTGAGTCAAACAAGCAAGGAAAGATGGATCCTTCTTCCAGAAGCGATGGAGCAGTAACATCCACTAGATCAAAGGGTGTATCCATGAAGTCTAATCTCAAGTCCAAAGATGGCAACAAATCGAAAAATTCCAAGACTAATAGGAAATCAGAGGATGAAGTTGGTGTTGGTGAGTCTAACAGGCAAGGAAAGACAGATCCTTCTTCCAAAAGTGATGGAGCAATAGCATCCCACAACTCAAAGGGTGTATCCATGAAGTCTACCCACAAGTCGAAAGATGGCAACAAATCAGAAGATTCCAAGACTATTAGCAAGTCAGAGGATGAAGTTTGTAGAAAATCTAAGGACAGCACTGCTAAAAATGGTAGCCGGAAATCTGTTGTTGCTGATAAAAAATTGAGTAATAAATTAGAAAACACTGATACTTCCAAGACAATTGAATCAAAGGATGATGAAATTAACATGCCAAAATCCTGTGTCAAGTCTAAGCATGAAGCTTTCAAAGGTGAAAAATCCAAACTAGAAATCCTGAAGACTACCTTATTGAAAGGAAAACGTCACAAAAGTGGTGGAAAAATAGATGTTGGCAATGGAAAGTCTGGTTTGTTGAAGAGAAAATATCCTGAGAATGATTCAGATGTTTCAGCAGGAGAGGTTAAAGATGTCAAGGGAAAGACTTCACATTCATCAAAGCTACAAGGAAGTGAACTCAAGAGTGGAAAGAAACGTCAGAGAAACTAG 2766 0.4038 MSIDKELEEQLLEVGNKLAVPPSSVEEVLQLLDQVESLLLRVGQAPSSSMENALSPSLKALIANKLLQHSDDNVKVAVGSCISEITRITAPEAPYDDDQMKDVFQLIVSAFENLHDKLSQSYAKRISILETVARVRSCVVMLDLECDALILEMFWHFLKTIREHHPANVFSSMETIMTLVLEESEDISLDLLSPLLTSIKKDHEEACPIAQKLGEKVLESCSTKLKPYLVQAVKSLGISVDDYSMVLASIFQEVNKDSREVTPSQQENPDGNISPKSVMSNGVTCVGDDNDLDTEKVDNSKQKSEHSTKRRQKKPTTSTKSAKRSKGEVATNAKETENESHSRKVPCSPSEDHSVEAAVLPKACYNESEVLASPPSESFHEENLSKKLGRTKMKDGSVREGAAENVSKVSGGASDSEAKPARKSVKKAHGQISDAKKTSVVDSLKKRSDSAIDADTEKHSAKKLDNNKKGIGGSSSRQMGDKKKGCWRKEMLSSPKSGTKSTKDENPETPKTTVMKLTSGKENESDTEKYGENVVGLRVKVWWPKDREFYKGVIHSFDSAKKKHKVFYDDGDEETLNLVKEKWKVIDADSDADEEEQREPASLDASTDMPPKKKGETSVGESNKQGKTDPSSRSDGVIASSRSLDVSMKSSHKSKDGKKSKGSNTTRKLEDVVSVGESNKQGKMDPSSRSDGAVTSTRSKGVSMKSNLKSKDGNKSKNSKTNRKSEDEVGVGESNRQGKTDPSSKSDGAIASHNSKGVSMKSTHKSKDGNKSEDSKTISKSEDEVCRKSKDSTAKNGSRKSVVADKKLSNKLENTDTSKTIESKDDEINMPKSCVKSKHEAFKGEKSKLEILKTTLLKGKRHKSGGKIDVGNGKSGLLKRKYPENDSDVSAGEVKDVKGKTSHSSKLQGSELKSGKKRQRN 921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03155 921 SMART TUDOR_7 531 590 IPR002999 -
Viun9g03155 921 MobiDBLite consensus disorder prediction 370 531 - -
Viun9g03155 921 SUPERFAMILY Tudor/PWWP/MBT 533 575 - -
Viun9g03155 921 MobiDBLite consensus disorder prediction 257 354 - -
Viun9g03155 921 MobiDBLite consensus disorder prediction 710 734 - -
Viun9g03155 921 PANTHER ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED 316 799 IPR039776 GO:0007064
Viun9g03155 921 MobiDBLite consensus disorder prediction 736 759 - -
Viun9g03155 921 MobiDBLite consensus disorder prediction 289 305 - -
Viun9g03155 921 FunFam Binding protein 530 582 - -
Viun9g03155 921 MobiDBLite consensus disorder prediction 761 868 - -
Viun9g03155 921 MobiDBLite consensus disorder prediction 380 401 - -
Viun9g03155 921 MobiDBLite consensus disorder prediction 327 350 - -
Viun9g03155 921 MobiDBLite consensus disorder prediction 587 921 - -
Viun9g03155 921 MobiDBLite consensus disorder prediction 419 466 - -
Viun9g03155 921 Pfam Sister chromatid cohesion protein PDS5 protein 27 231 - -
Viun9g03155 921 Gene3D - 525 580 - -
Viun9g03155 921 MobiDBLite consensus disorder prediction 879 902 - -
Viun9g03155 921 MobiDBLite consensus disorder prediction 680 709 - -
Viun9g03155 921 MobiDBLite consensus disorder prediction 257 284 - -
Viun9g03155 921 MobiDBLite consensus disorder prediction 306 320 - -
Viun9g03155 921 MobiDBLite consensus disorder prediction 648 666 - -
Viun9g03155 921 MobiDBLite consensus disorder prediction 621 647 - -
Viun9g03155 921 SUPERFAMILY ARM repeat 62 236 IPR016024 -
Viun9g03155 921 CDD Tudor_Agenet_AtEML-like 535 585 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03155 Viun-Chr9 38912467 38923635 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03155 - - vun:114163817 1719.52