Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Viun9g03129 | ATGGCGTCCAAGAAGAAGCACTCGGAGGGCATCGCCTTGTTGTCCATGTACAACGACGAGGAAGACGATGAAATGGAGGTCGACGACGAAGAAGAAGATGCGAGAATAGGTATGGAAGAAGATGCCGCGGTAGATGCGAGATTTGCAGCGGAGGAAGATTCCGCAAATAGAACAGCGGTCCTTGATTCAGGTAAGGAGGGCGCTGATGAGGGGGCTTCAACACCGCCGAATAACAATTTAATTTCTCCACCGTCGGAGGAACCTATGATTAGTCGAAAAGGGGCGCTTACGATAGTTGATTACGGCCATGACGAAGTTGCGATGTCACCTGAGCCTGAGCAGGAGGGGGAAATATATGGTAGCGGTCGAGTCATGATTGGGGAGCAGCTTCATGTCACCAATGGGGATTTGCTGGAGAAGACACTATTAGGAACAACTTTGACACCTAGCAATCAAGTTAGCACTCCTCAGTTATCCGATGAAGCAGAACTGGGTGAAGGAGATCAGGATGATCCATTGGATAAATTTCTTCCTCCCCCACCAAAAGCTAAATGTTCAGAGGAGCTACAAAGAAAAATAAATAAATTTCTGGAATACAAGAAGGCCGGAAAAAGTTTTAATGCTGAAGTTCGAAACAGGAAGGATTATCGAAACCCTGACTTCTTATTGCATGCAGTGAGGTACCAGGATATTGATCAAATTGGGTCTTGCTTCAGTAAAGATGTATTTGATCCTCATGGATATGATTCTAGTGACTTCTATGATGAAATAGAAGCTGATATGAGGCGCGAAAGTGAGAGGAAAGAGCAAGAGAAGAAGAAAGCACAGAAAGTTGAATTCATCGCAGGGGGCACGCAGCCAGGAATTGTAGCTAGCGCTCCTAGGATTAGCATGCCTGTTGCAGGTGCTTCTGCTGTGACTACAAGTGGTTTGCCTTTGGTGCCTCCTACTGCTGATTCTCGGGATGGTAGACAGAATAAAAAATCAAAATGGGATAAGGTGGATGGTGATAGAAAAAATCCTCTGCCCTCTGCGGGGCAGGATTCTGTGTCTACCATTGGGACTCATGCAGCACTCTTATCTGCTGCTAATGCTGGTGGTGGATACATGCAATTTGCGCAACAAAAACGGCGGGAGGCAGAGGAAAAAAGATCCAGTGAAAGGAGATTGGAAAGAAGATCCTGA | 1185 | 0.4624 | MASKKKHSEGIALLSMYNDEEDDEMEVDDEEEDARIGMEEDAAVDARFAAEEDSANRTAVLDSGKEGADEGASTPPNNNLISPPSEEPMISRKGALTIVDYGHDEVAMSPEPEQEGEIYGSGRVMIGEQLHVTNGDLLEKTLLGTTLTPSNQVSTPQLSDEAELGEGDQDDPLDKFLPPPPKAKCSEELQRKINKFLEYKKAGKSFNAEVRNRKDYRNPDFLLHAVRYQDIDQIGSCFSKDVFDPHGYDSSDFYDEIEADMRRESERKEQEKKKAQKVEFIAGGTQPGIVASAPRISMPVAGASAVTTSGLPLVPPTADSRDGRQNKKSKWDKVDGDRKNPLPSAGQDSVSTIGTHAALLSAANAGGGYMQFAQQKRREAEEKRSSERRLERRS | 394 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Viun9g03129 | 394 | MobiDBLite | consensus disorder prediction | 49 | 91 | - | - | |
| Viun9g03129 | 394 | MobiDBLite | consensus disorder prediction | 147 | 185 | - | - | |
| Viun9g03129 | 394 | MobiDBLite | consensus disorder prediction | 375 | 394 | - | - | |
| Viun9g03129 | 394 | Coils | Coil | 254 | 278 | - | - | |
| Viun9g03129 | 394 | MobiDBLite | consensus disorder prediction | 370 | 394 | - | - | |
| Viun9g03129 | 394 | MobiDBLite | consensus disorder prediction | 16 | 34 | - | - | |
| Viun9g03129 | 394 | MobiDBLite | consensus disorder prediction | 307 | 350 | - | - | |
| Viun9g03129 | 394 | Coils | Coil | 370 | 394 | - | - | |
| Viun9g03129 | 394 | MobiDBLite | consensus disorder prediction | 1 | 34 | - | - | |
| Viun9g03129 | 394 | Pfam | HCNGP-like protein | 177 | 270 | IPR012479 | GO:0006355 | |
| Viun9g03129 | 394 | MobiDBLite | consensus disorder prediction | 321 | 339 | - | - | |
| Viun9g03129 | 394 | PANTHER | TRANSCRIPTIONAL REGULATOR PROTEIN HCNGP | 1 | 376 | IPR012479 | GO:0006355 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Viun9g03129 | Viun-Chr9 | 38732162 | 38736615 | Tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Viun9g03129 | K26267 | - | gmx:100527074 | 575.089 |