Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03116 ATGTACAGAGTAGCGAAGGCATCAGAGTATCTTGTGATCACCGGGGTTGGAATCAGAGACATAAAGCTCGCAAAGAAAGGATGGGTGCTTCCGGGGCAGTCATGCACCGTCTTCGACCTGTCTCCGGTGAACTACACTTTCGAGGTTCAAGCCATGAGCGCAGAGAAGCTCCCTTTCATTCTCCCCGCCGTGTTCACCATCGGTCCCAGAGTCGACGACGACGGTAGCCTTCTCAGATATGCCAAACTTCTGTCGTCCCACGACAAGCTCTCTCACCACGTGAAGGAGCTAGTCCAGGGCATCATCGAGGGAGAGACACGTGTCCTTGCGGCATCCATGACCATGGAGGATATTTTCAGAGGCACCAAGTCGTTCAAACAGGAGGTGTTCGAGAAGGTTCAGCTGGAGCTCAACCAGTTCGGGCTTCTCATCTACAACGCCAACGTGAAGCAACTGGTGGACGTGGCTGGCCACGAGTACTTCTCTTATCTGGGTCAGAAGACTCAGATGGAGGCTGCCAATCAAGCCAAGGTTGACGTCGCAGAGGCAAAGATGAAGGGAGAGGTTGGAGCCAAGCTCAGAGAGGGGCAGACGCAGCAGAACGCTGCCAAGATCGATGCGGAAACAAAGATAATATCCACGCAGAGGCACGGAGAAGGTGTGAAGGAGGATATCAAGGTGAAAACGGAGGTGAAGGTGTTTGAAAATGAGCGAGAGGCTGTGGTGGCGGAGGCTAATTCCGAGCTTGCCAAGAAAAAAGCTATGTGGGCACAGACGGCGCAGGTGGCGGAAGTGGAGGCCACAAAAGCCGTCGCACTCAGGGAAGCCGAGTTGCAGAGAGAGGTTGAAAGGATGAACGCTCTCACAAGAACAGAGAAGCTTAAAGCTGAGTTCCTCAGCAAAGCAAGTGTTGAGTACGAAACCAAGGTACAAGAAGCGAACTGGGAGCTGTACAGGAAGCAGAAAGCAGCAGAAGCAATATTGTTTGAGAAGGAGAAAGAGGCAGAGGCACAAAAAGCTCTGGCGGAGGCAGCGTATTTCAGTCGGCAACAAGCAGCAGAAGCTGAGCTATTTGCAAAGAAAAAGGAGGCAGAGGGACTTCTGGCAATTGGGCAAGCACAAGGAGTATACTTAAGAACACTTCTTGATGCACTGGGAGGAAACTACACTAATCTAAGGGACTACTTGATGATAAATAGTGGCATGTTTCAAGAGATTGCGAAGACTAATGCAGAAGCAATTCGTGGACTTCAGCCAAAGATTAGTATTTGGAGTAATGGCACAGATGGAAGTGATGGTGGTGGTGGAATGAAGGATGTAGCTGGTGCGTACAAGATGTTGCCACCTTTGTTTAAGACGGTGCATGAGCAAACGGGTATGTTGCCACCCGCTTGGATGGGAACCCTATCAGACAAAAGTTCTTGA 1425 0.5074 MYRVAKASEYLVITGVGIRDIKLAKKGWVLPGQSCTVFDLSPVNYTFEVQAMSAEKLPFILPAVFTIGPRVDDDGSLLRYAKLLSSHDKLSHHVKELVQGIIEGETRVLAASMTMEDIFRGTKSFKQEVFEKVQLELNQFGLLIYNANVKQLVDVAGHEYFSYLGQKTQMEAANQAKVDVAEAKMKGEVGAKLREGQTQQNAAKIDAETKIISTQRHGEGVKEDIKVKTEVKVFENEREAVVAEANSELAKKKAMWAQTAQVAEVEATKAVALREAELQREVERMNALTRTEKLKAEFLSKASVEYETKVQEANWELYRKQKAAEAILFEKEKEAEAQKALAEAAYFSRQQAAEAELFAKKKEAEGLLAIGQAQGVYLRTLLDALGGNYTNLRDYLMINSGMFQEIAKTNAEAIRGLQPKISIWSNGTDGSDGGGGMKDVAGAYKMLPPLFKTVHEQTGMLPPAWMGTLSDKSS 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03116 474 Pfam SPFH domain / Band 7 family 7 184 IPR001107 -
Viun9g03116 474 PANTHER FLOTILLIN-RELATED 1 470 IPR027705 -
Viun9g03116 474 Gene3D Band 7 domain 38 155 IPR036013 -
Viun9g03116 474 SUPERFAMILY Band 7/SPFH domain 33 172 IPR036013 -
Viun9g03116 474 CDD SPFH_flotillin 28 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03116 Viun-Chr9 38649005 38650835 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03116 K07192 - gmx:547522 788.489