Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03100 ATGCAGAGACGAAGTCCTCCAAAGCACAGACACGATGGAACTTCGCCGCTGCCTCTCGGCATGGATTGGAGTCCCGCGCCTCGTAAATGGAATGGGCAAGATACAGTATGGCCACACAATCATCGTACTGGATGGAGTTATTGTGTCACGATACCTTCTTGGTCCTTTGTTCCAAAATCAAGGAATTCAGATCCTGTAGTGTTCTACAGGGTTCAAGTTGGTGTACAGTCACCAGAAGGGATTACAAGGCTCCATGGAGTATTAAGAAGGTTCAATGATTTTTTAAAGTTGTTTGCTGATCTTAAAAAGGAGTTTCCCAGGAAAAATATCCCTCCAGCTCCGCCCAAGGGACTCTTGCGTTTGAAAAGCCGAGCTTTGTTAGAAGAGAGAAGGTGCTCTTTGGAAGAGTGGATCACGAAACTATTGTCCGACATTGATGTATCAAGATGCGCTGCAGTGGCATCATTTCTCGAACTAGAAGCAGCTGCTAGATTTTCATTCCAAGATACAAGCCAGCAAAATTCTGAAACAGATCCTGATTCCAATAACACAGTTTATTCTGTGCAATCACCTCTCCAGTCAAGCTTATCGTTACTTGCTGGCAGTTCATCGGTTGCCTCTGATTATGGTAGTGATACCGCATATGAGCCATCTGACCTTGGAACACCAAGAGTTGGACGGGATGATAATTCTGATGTTGGTACGGATGATCTAACATTAGATGAAGATATGACAAATCCAATAGAAAAGCTTGTGAAATATGGCATATCAAATATTGACGAAGGTTTATTTATGGGTCAGACTATTCTAGAGCAATTGGAAGGCCTTCCTAGGCATAAAGCAAATGCCAGACATGTGAACTATGTTACACAGAAGGACAAAAATAATGGAAATTTATACGATTCTTCACTTTTAGGTAATAATACCATGGAGCTTTTCTCTGAGCCTGGGCATGCCAAGGTTGTTGGTCATGTGCGTAAGCTTTCAAATGAGAGTTTTGGAAGTGAAGGAAGTTCATTACGGGGTAGTGACATCTCTAATTTTGGGATTCCAAATTCCTCTGGTGAGGGCTCTCATGACCTTCCTGGATCTGCTTCGGTTTCAAGAGACACGGATATTATGGGCCACACAAAGTTGAAATCTACTGGTGATACTCAATTAGTCTTTCCACTAGATCAACGCAATAAATTGAACAGGATTCTTTCAACTATGCAACGAAGGCTAGGCACTGCAAAAACTGATATGGAGGACCTTATTGTTAGATTAAATCAAGAAATAACTGCAAAGGATTTTCTTGCAACTAAGGTCAAGGATTTGGAAGTAGAACTTGAAACTACCAAACAGAAAAACAAGGAGAACTTACAGCAGGCTATTCTAATTGAGAGAGAAAGGTTTACCCAAATGCAGTGGGATATGGAGGAACTTAGACGAAAATCAATGGAAATGGAGATGAAACTAAAATCAGAAACGGGGGGGAATTCTTACCAGAATTCGACAAAGGAATCAATTGTTCTGCAGAATGATGTGCTATTACAGAATTTAGAAACTGCTAAAGAGCATCTAGAAGTTTTGTCAAAACAGTATGGAGAGCTAGAAGCAAAATCCAAGGCAGATGTTAAAGTTCTGGTTAAAGAGGTCAAATCTCTTCGTAATTCCCAAACAAAGTTGAAGAAGGAGCTTAGTGAGTCGATAAAAGAAAACAGTGAAACTGAGAAACAACTACTTCAGGAAAGAGAGAGGAGGGAACAGGCAGAAGCTGCACGGAGAAAACTGCTGGAGAAATGCAGGTTTCTTTTCAACCAGCTTCAGGAGTGCAATGTCAGTCTTCCTTACGAATGTGAAGATAGAACAGTCATGAATTCATCGTCATTGAGTGATGCTTTTAATCAGTTAACGACATCCGATGACCAAATGGACACCCTATTATCAGAGGTAGAAAATTTAGATAAGGAATATGGAAGTGCGGCTTCGAGTGTAGATAAAGCCAATGGCACCAAAGATGGTATAATCTGTGATGATGAAGTGGGTAAGATCATAGCAGACTTGTTGATGGATAATGTTAGACTGAGAAAACAGACAAACCGTGTCGCAAAGCATGCTCTGAAATTGGACATGACAGCAACTGAAGATACCCCTTCAATGGAAACTATATCAGGTATTTAG 2163 0.4092 MQRRSPPKHRHDGTSPLPLGMDWSPAPRKWNGQDTVWPHNHRTGWSYCVTIPSWSFVPKSRNSDPVVFYRVQVGVQSPEGITRLHGVLRRFNDFLKLFADLKKEFPRKNIPPAPPKGLLRLKSRALLEERRCSLEEWITKLLSDIDVSRCAAVASFLELEAAARFSFQDTSQQNSETDPDSNNTVYSVQSPLQSSLSLLAGSSSVASDYGSDTAYEPSDLGTPRVGRDDNSDVGTDDLTLDEDMTNPIEKLVKYGISNIDEGLFMGQTILEQLEGLPRHKANARHVNYVTQKDKNNGNLYDSSLLGNNTMELFSEPGHAKVVGHVRKLSNESFGSEGSSLRGSDISNFGIPNSSGEGSHDLPGSASVSRDTDIMGHTKLKSTGDTQLVFPLDQRNKLNRILSTMQRRLGTAKTDMEDLIVRLNQEITAKDFLATKVKDLEVELETTKQKNKENLQQAILIERERFTQMQWDMEELRRKSMEMEMKLKSETGGNSYQNSTKESIVLQNDVLLQNLETAKEHLEVLSKQYGELEAKSKADVKVLVKEVKSLRNSQTKLKKELSESIKENSETEKQLLQERERREQAEAARRKLLEKCRFLFNQLQECNVSLPYECEDRTVMNSSSLSDAFNQLTTSDDQMDTLLSEVENLDKEYGSAASSVDKANGTKDGIICDDEVGKIIADLLMDNVRLRKQTNRVAKHALKLDMTATEDTPSMETISGI 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03100 720 MobiDBLite consensus disorder prediction 210 241 - -
Viun9g03100 720 SMART PX_2 43 160 IPR001683 GO:0035091
Viun9g03100 720 PANTHER PX DOMAIN-CONTAINING PROTEIN EREL1-RELATED 1 715 IPR044588 GO:0015031
Viun9g03100 720 Pfam PX domain 87 158 IPR001683 GO:0035091
Viun9g03100 720 Coils Coil 429 456 - -
Viun9g03100 720 MobiDBLite consensus disorder prediction 1 24 - -
Viun9g03100 720 MobiDBLite consensus disorder prediction 331 366 - -
Viun9g03100 720 MobiDBLite consensus disorder prediction 168 187 - -
Viun9g03100 720 Coils Coil 631 651 - -
Viun9g03100 720 SUPERFAMILY PX domain 40 160 IPR036871 GO:0035091
Viun9g03100 720 Coils Coil 539 601 - -
Viun9g03100 720 MobiDBLite consensus disorder prediction 331 365 - -
Viun9g03100 720 ProSiteProfiles PX domain profile. 47 164 IPR001683 GO:0035091
Viun9g03100 720 Coils Coil 507 534 - -
Viun9g03100 720 Gene3D - 46 186 IPR036871 GO:0035091
Viun9g03100 720 FunFam Phox (PX) domain-containing protein 46 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03100 Viun-Chr9 38503515 38513740 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03100 - - gmx:100792151 1238.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03100 9 38503515 38513740 Viun9g03100 9 38503515 38513740 ECH