Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03087 ATGGCTCCCACGACGATCCGGAAGGCGATTGGGGTGGTGAAGGACCAGACCAGCATAGGGATTGCGAAGGTCGCCAGCAACATGGCGCCGGAAATGGAGGTCGCGGTGGTCAAGGCCACCAGCCACGACGACGACCCCGCCAGCGAGAAGTACGTCAGGGAGATCTTGAACCTCATGTCGCACTCGCGCGGCTACGTCCACGCATGCGTCTCCGCGGTGTCCAAGCGTTTGGGGAAGACGCGCGACTGGATTGTGGCGCTCAAGGCGCTCATGCTCGTGCACAGGCTCATGAACGAGGGTCCCCCCCTGTTCCAGGAGGAGATCCTTTACGCCACCCGCAGGGGAACACGGCTCCTCAATATGTCTGATTTCAGAGACGAGGCTCACTCCAGCTCCTGGGATCACTCCGCTTTTGTGAGGACCTATGCTATGTATCTCGACCAGAGGCTTGAGTTGATGCTGTTTGATAGAAAGAGCACCGCCGCCGGTGCCGGTGGTGGTAGTGTTGGCGGCGGCGGTGGTGCTGATGATAGGTTTGGCGGAAGGGACAATTTCCGGTCGCCGCCGTACGAGTACGGTGGTGGGGACTATAGAGGGGAAGGTAGTTATGGGTATGATAATGGGATGAGGAGGACGAGGTCTTTTGGGGACATGAGTGAATCGGTGGGCAGGGGGGATGAGAGGAGTGTTGTTGTGAGTGTGACTCCTTTGAGGGATATGACTCCGGAGAGGGTTTTCGGTAAGATGGTTCATTTGCAGAGGTTGTTGGATCGGTTTCTGGCTTGTAGGCCTACTGGGTTGGCGAAGAATAGTAGGATGGTCTTGATTGCTCTGTATCCGGTGGTTAAGGAGAGTTTTCAGTTGTATGCTGATATATGTGAGGTTTTGGCTGTTTTGCTTGACAAGTTCTTTGATATGGAGTATGCCGATTGCGTGAAGGCTTTTGATGCTTATGCCAGTGCGGCTAAGCAGATTGATGAGCTTGTTGCTTTTTATAATTGGTGTAAGAATACTGGTGTGGCGAGGTCCTCGGAGTACCCTGAGGTTCAGAAAATTACCAGCAAGTTGCTTGAGACGTTGGAGGAGTTTGTGAGGGATAGGGCCAAGAGGCCGAAGAGTCCCGAGCGAAAAGAGGAGGCTCCACCTGTAGAGAAGGTAGAGGAGGAGCCGGCACCAGATATGAACGAAATCAAGGCATTGCCTCCTCCGGAGAATTATACCCCTCCTCCTCCGCCTGAGCCTGAGCCTAAGCCCCAGCCGCAGGTTACAGAGGATTTGGTGAATCTGAGAGATGATGCAGTCACGGCAGATGACCAGGGGAATAAGTTTGCTTTGGCACTCTTTGCTGGCGCGCCTGCCAATAATGCAAATGGATCATGGGAAGCATTCCCTTCAAATGGACAACCAGAAGTGACTTCGGCCTGGCAAAACCCAGCTGCAGAGCCCGGAAAAGCTGATTGGGAATTGGCATTGGTAGAGACCGCAAGCAATTTGTCGAAGCAGAAGGCAGCTTTAGGTGGTGGTTTGGATCCTCTATTGTTGACTGGCATGTATGATCAAGGAATGGTGAGGCAGCATACCAGCACTACCCAATTGAGTGGAGGGAGTGCAAGCAGTGTGGCATTGCCAGGACCGGGGAAGACTACAACCCCTGTTTTGGCTCTCCCTGCCCCAGATGGATCTGTTCAGCCAGTTAATCAGGATCCATTTGCTGCATCATTGAGCATTCCACCCCCATCATATGTCCAAATGGCTGATATGGAGAAGAAGCAGCATTTGCTTGTGCAGGAGCAGCAGGTGTGGCATCAGTATGCAAGGGATGGGATGCAAGGCCAATCTAGTTTGTCCAAACTGAGTGGCCCTGGATACTATGCCGGAGGTCCTATGCCCATGATGCCTTATGGAATGCCCCCAGTCAATGGAATGGGACCTCCAACCGGGTATTATCAAACTCCTTACTGA 1962 0.5331 MAPTTIRKAIGVVKDQTSIGIAKVASNMAPEMEVAVVKATSHDDDPASEKYVREILNLMSHSRGYVHACVSAVSKRLGKTRDWIVALKALMLVHRLMNEGPPLFQEEILYATRRGTRLLNMSDFRDEAHSSSWDHSAFVRTYAMYLDQRLELMLFDRKSTAAGAGGGSVGGGGGADDRFGGRDNFRSPPYEYGGGDYRGEGSYGYDNGMRRTRSFGDMSESVGRGDERSVVVSVTPLRDMTPERVFGKMVHLQRLLDRFLACRPTGLAKNSRMVLIALYPVVKESFQLYADICEVLAVLLDKFFDMEYADCVKAFDAYASAAKQIDELVAFYNWCKNTGVARSSEYPEVQKITSKLLETLEEFVRDRAKRPKSPERKEEAPPVEKVEEEPAPDMNEIKALPPPENYTPPPPPEPEPKPQPQVTEDLVNLRDDAVTADDQGNKFALALFAGAPANNANGSWEAFPSNGQPEVTSAWQNPAAEPGKADWELALVETASNLSKQKAALGGGLDPLLLTGMYDQGMVRQHTSTTQLSGGSASSVALPGPGKTTTPVLALPAPDGSVQPVNQDPFAASLSIPPPSYVQMADMEKKQHLLVQEQQVWHQYARDGMQGQSSLSKLSGPGYYAGGPMPMMPYGMPPVNGMGPPTGYYQTPY 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03087 653 MobiDBLite consensus disorder prediction 365 422 - -
Viun9g03087 653 ProSiteProfiles ENTH domain profile. 24 160 IPR013809 -
Viun9g03087 653 CDD ANTH_N_AP180_plant 33 152 - -
Viun9g03087 653 FunFam Clathrin coat assembly protein 3 156 - -
Viun9g03087 653 MobiDBLite consensus disorder prediction 365 394 - -
Viun9g03087 653 Gene3D - 2 156 IPR008942 -
Viun9g03087 653 SUPERFAMILY GAT-like domain 236 366 - -
Viun9g03087 653 MobiDBLite consensus disorder prediction 402 419 - -
Viun9g03087 653 PANTHER CLATHRIN ASSEMBLY PROTEIN 7 596 IPR045192 GO:0048268|GO:0072583
Viun9g03087 653 SUPERFAMILY ENTH/VHS domain 30 151 IPR008942 -
Viun9g03087 653 Gene3D ANTH domain 232 377 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Viun9g03087 653 FunFam putative clathrin assembly protein At2g25430 231 376 - -
Viun9g03087 653 Pfam ANTH domain 211 366 IPR011417 GO:0005543
Viun9g03087 653 Pfam ANTH domain 32 152 IPR011417 GO:0005543
Viun9g03087 653 SMART enth_2 30 160 IPR013809 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03087 Viun-Chr9 38444898 38447591 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03087 - - gmx:100787076 1105.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03087 9 38444898 38447591 Viun9g03087 9 38444898 38447591 ECH