Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03060 ATGATGAAGCTCTTCTCCTTTGTAATATTGTTAAGCCTTTTTCTCAAACAGGTGAGCCTAGTTATTGGAGACGTTGGCACTGCTGCATCTTATGGACCACCTTACATACCTACTGCTTGCGGTGGAAACAGGGCAGGGCAATTTCCTCCTGGAAATCTATTTGTGGCTGTGAATGAAGGGTTATGGGATAATGGAGCAGCGTGTGGAAGGAGATACAGAATAAGGTGTGTGAGTGGAAACAATAAACCATGCAAAGGTGGTAGCATCGATGTCAAAGTCGTAGATTCTTGTTCTGCCTCACCTTGTCCCAACAGTCTCCTCATGTCAAATGATGCTTTTGCAGCTATTTCACGCTTCCCTCATGCAAAAATCAACATTGAATATACCCAGATATGA 396 0.4343 MMKLFSFVILLSLFLKQVSLVIGDVGTAASYGPPYIPTACGGNRAGQFPPGNLFVAVNEGLWDNGAACGRRYRIRCVSGNNKPCKGGSIDVKVVDSCSASPCPNSLLMSNDAFAAISRFPHAKINIEYTQI 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03060 131 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 37 131 IPR007112 -
Viun9g03060 131 SUPERFAMILY Barwin-like endoglucanases 22 131 IPR036908 -
Viun9g03060 131 Gene3D - 24 131 IPR036908 -
Viun9g03060 131 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 4 130 - -
Viun9g03060 131 CDD DPBB_EG45-like 24 129 - -
Viun9g03060 131 Pfam Lytic transglycolase 56 128 IPR009009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03060 Viun-Chr9 38264064 38265163 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03060 - - gmx:100792215 241.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03060 9 38264064 38265163 Viun9g03060 9 38264064 38265163 ECH