Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03033 ATGCAGCATCAATGTCTTCTACTCTCTCCCTTCGCTTCATCCTCTGCACTCTTCCTCTCCTCACTCTTCCTCCGCCACTCTCTCGCTGACGTCGGCACTGCTGCACACTATGGCCCTCCCTTTCTGCCCAGTGCATGTTACGGCAGAGACGCGTCGCAGTTTCCGTCGAATAACTTCTTTGGTGCCGTCGGCGAGGGTTTATGGGACAATGGCGCCGCATGTGGGAGGCAGTATCAGGTGCGGTGCATCAGCGCTGCGGTTCGCAGAACTTGCATTCCTGGCCAGATGATTCAGATCAAGATCGTTGATCGAGCGCAATCATCGGTTTCTAGGCCTTCTTTAGCTGGAACTACGTTGGTCCTCTCCTCCAGGGCCTTTCAGGTCATCGCCAACGCTTCTGCACCTTTCATTAACGTAGAATACCAACAGGTTTGA 435 0.5402 MQHQCLLLSPFASSSALFLSSLFLRHSLADVGTAAHYGPPFLPSACYGRDASQFPSNNFFGAVGEGLWDNGAACGRQYQVRCISAAVRRTCIPGQMIQIKIVDRAQSSVSRPSLAGTTLVLSSRAFQVIANASAPFINVEYQQV 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03033 144 CDD DPBB_EG45-like 30 142 - -
Viun9g03033 144 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 43 144 IPR007112 -
Viun9g03033 144 SUPERFAMILY Barwin-like endoglucanases 18 144 IPR036908 -
Viun9g03033 144 Pfam Lytic transglycolase 66 141 IPR009009 -
Viun9g03033 144 Gene3D - 30 144 IPR036908 -
Viun9g03033 144 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 15 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03033 Viun-Chr9 38093839 38094981 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03033 - - gmx:100803494 209.149
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03033 9 38093839 38094981 Viun9g03033 9 38093839 38094981 ECH