Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03008 ATGGCTTCAACACTCAACGCAACTATTTTCAACTATTTTCTCATTCTTCATCTCATCTTTAACCACCTCACACAAACACAAGCAACCGCAAAAATCGGTGTTAATTATGGAACACTCGCAAACAACCTTCCTCCACCTTCCGAGGTCGCGAAATTCCTCTCCAAATCCACCACAATCAACAGAGTCAGAATCTTCGACGCCAACCCTCAAATTCTACGCGCTTTTGCCAACACCGGCATAGAAGTAACCATAACTGTCCCCAACGACCAAATCCCCCAAATAACTAACTTAACCTTCGCACAACAATGGGTCAAAACCAACGTCCAACCGTTCCTCCCCGCCACCAAACTAATCCGAATCCTCGTCGGCAACGAAGTGCTCTCCACCGCCAACAAACTCCTCATCAGCAACCTTGTACCCGCCATGCAAACCCTTCACGCGGCCCTCGTCACAGCATCGTTGGCCAACAACGTTAAAGTCTCAACCCCACACTCTTTGGGCATTCTGTCGAACTCAAGCCCTCCCTCAACCGCCAAGTTCAGACAAGGCTACGACATGCACATCATCAAACCAATGCTTAGTTTTCTCAAAGATTCCGATGCACCCTTCATGGTTAACCCTTACCCTTTCTTCGGATCCTCTGCCACCAACCTTGATTATGCACTCTTTCGGACCAATTCCGGTGTATTCGACGACAACACCAATCTCCGATACACCAACATGTTGGACGCGCAACTCGATGCTGTTTATTCCGCGCTCAAGGTTTTGGGCTTTGAGGATGTTCAGATTGTCATTGCCGAAACGGGCTGGCCCTCTTTCTGTGATCCGGCCCAAATCGGCGTTGACCCGAACGCTGCTTCTGAGTACAATGGAAATCTCATACGACACGTCAATTCTGGGGTTGGAACACCTCTCATGCCTAACAGGACTTTCGATACCTATATTTTTGCTTTGTTTGATGAAAATTTAAAGCCCGGCCCAACTTGTGAGAGGCATTTTGGGCTCTTCTGGCCCAATATGAGTCTCGTTTATGACGTCCCGATAATGAGGAACGATGCAGCTGTTGTTGGTAATAGACATTATTATTATAAAGCTTTTTTCTCATTCATCGTCGTCTTCAACTTCATTTCTACGTCATGGGTTTAA 1146 0.4695 MASTLNATIFNYFLILHLIFNHLTQTQATAKIGVNYGTLANNLPPPSEVAKFLSKSTTINRVRIFDANPQILRAFANTGIEVTITVPNDQIPQITNLTFAQQWVKTNVQPFLPATKLIRILVGNEVLSTANKLLISNLVPAMQTLHAALVTASLANNVKVSTPHSLGILSNSSPPSTAKFRQGYDMHIIKPMLSFLKDSDAPFMVNPYPFFGSSATNLDYALFRTNSGVFDDNTNLRYTNMLDAQLDAVYSALKVLGFEDVQIVIAETGWPSFCDPAQIGVDPNAASEYNGNLIRHVNSGVGTPLMPNRTFDTYIFALFDENLKPGPTCERHFGLFWPNMSLVYDVPIMRNDAAVVGNRHYYYKAFFSFIVVFNFISTSWV 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03008 381 Gene3D Glycosidases 30 355 - -
Viun9g03008 381 FunFam Glucan endo-1,3-beta-glucosidase 3 31 351 - -
Viun9g03008 381 SUPERFAMILY (Trans)glycosidases 32 346 IPR017853 -
Viun9g03008 381 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 20 348 IPR044965 GO:0004553|GO:0005975
Viun9g03008 381 Pfam Glycosyl hydrolases family 17 32 346 IPR000490 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03008 Viun-Chr9 37907960 37909892 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03008 12 352 Miscellaneous Gene Families AT3G46570 54.942 6.52e-118 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03008 - - gmx:100795377 583.948