Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02987 ATGAGCTCCAAGCCTGCTTCAGGGAAGGGGAGCAGGCCCGGGCGGCGTCACATGATGAGAGGGTGCCTTTGCCATTTCACTATTAAAAGACTGTACACCAGACCTCTCCTTGCACTTATCATATATAACCAAAAAAGGCACGTAGATAAATCAGGGTCACCATGTCATGGATTGCTTGACAGGGATGCGGTGGGGACGAGAGCTATGTATGCTCCACGAATTTCAGATGAGTTACGCCAGAAAGTGATGTCTTTGCTTTATGTTGGAATATCTTTGGATAAGATAGTACAGCACCATTCAGAGGAGATGCAGAAGCTAGGTGGGCCCCAAAACCGTGATGATTTTCTCACTCGAAATGATGTGCGTAATATGGAAAGGACTATTCGTAATTCTTCACATGAGCTACACGAAAATGATGAACGCAGTGTAAAGATATGGGTTCAGAGGCATCAGAAGCATGTTTTCTATTTTCAAGATAAGTCAGTTTCAGAACCATTTGTGTTGGGTATACAGACAGATTGGCAGCTGGAACAAATGCTCCGTTATGGAAATAATAGTTTAATTTCGCTTCATTCAGGTTTTGGCTTGAAAAAGCTCAAGTATCCTCTATGTTCTTTACTTGTTTTCAATTCATCCCAAAATGCAATTCCGGTTGCCTGGATCATCACCTCTTCTTTTGTTGGTAAATCTATTCATAAGTGGATTGTATCGCTATCTGAAAGATTACGATCAAAGGATCCCAGATGGAGGCCGAATGCTATTTTGTTGGATGATCCATCTTTGCAATTTTCTATCATAAGAGAGGCTTTCCAGTGTCGCATCCTGTTATGTGCCTGGCATGTTCGCCGTGCTTTGGTTAAAAAACTCCTCAAAAAATGCTGCAACTTTGAGGTGCAACGCGAGATGTTTATGCATTTGGAATGGATTCTGTACTGTACAAAATGTGGGCCAAATGCTATGGATTCTCTTGAAGAGTTTATGCAAATTTTTGTTGACCAGTGTGCCTTTATGGACTATTTCAAGAACCATTGGCAATCTAGAATAGATATGTGGATTGATGCCATAAAATCATTCCCGGTGACAAACCCTGAGCCCCATGCTGCAATAGAATCCTATCATCTAACATTAAAATCTATGCTTCTGAAGGAGGATTATGGTAATTTCTGGCTAAGAGTTGACTGGTTAATCCATGCTTTAACTACTGAATTTCACTCGTCATACTGGTTGACTCAGTACAGTTTAGAGACAGGATATTTTGAGAATCTAAGGGACAATTCTTTCTCCTCTAATGCTTGGAATCATGCTCTTCGTATTCCTGATGTTGATGTGATGCTGGATGAGCAAAATCTCCATCTTGCCAAAGTTTTATCCCAGACTGACAGAAGTTTGGTATATACAGTTTGGAATCCTGGTTCAGAATTTTCACTTTGTGATTGTTCCTGGTCTAGGTTGGGAAACCTCTGTAAACATGTCATCAAAGTGGCAAATTTCTGTAGACATCGGCAGGTTGCAAAACCATCATTGTCTGCTCATGTTTATAAACAGACTTTGCTCACCCTTCTCCAAAATCCTCCTGATGATCCTTTAGTTCTGGACCATACTGTACTACATGTGGCCCGTTTGCAACAAGACATTAAGGCCTTGAAAGACTTGTCCAACAGTGGATTGCTCCAGCCTATATCTGTTGATTTAAGTTCTCAAATGGCTGAAAATCCTCTGCTTTTTCAACGCATCCAGTGA 1740 0.4109 MSSKPASGKGSRPGRRHMMRGCLCHFTIKRLYTRPLLALIIYNQKRHVDKSGSPCHGLLDRDAVGTRAMYAPRISDELRQKVMSLLYVGISLDKIVQHHSEEMQKLGGPQNRDDFLTRNDVRNMERTIRNSSHELHENDERSVKIWVQRHQKHVFYFQDKSVSEPFVLGIQTDWQLEQMLRYGNNSLISLHSGFGLKKLKYPLCSLLVFNSSQNAIPVAWIITSSFVGKSIHKWIVSLSERLRSKDPRWRPNAILLDDPSLQFSIIREAFQCRILLCAWHVRRALVKKLLKKCCNFEVQREMFMHLEWILYCTKCGPNAMDSLEEFMQIFVDQCAFMDYFKNHWQSRIDMWIDAIKSFPVTNPEPHAAIESYHLTLKSMLLKEDYGNFWLRVDWLIHALTTEFHSSYWLTQYSLETGYFENLRDNSFSSNAWNHALRIPDVDVMLDEQNLHLAKVLSQTDRSLVYTVWNPGSEFSLCDCSWSRLGNLCKHVIKVANFCRHRQVAKPSLSAHVYKQTLLTLLQNPPDDPLVLDHTVLHVARLQQDIKALKDLSNSGLLQPISVDLSSQMAENPLLFQRIQ 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02987 579 PANTHER ZINC ION BINDING PROTEIN 9 561 - -
Viun9g02987 579 ProSiteProfiles Zinc finger SWIM-type profile. 465 499 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02987 Viun-Chr9 37792472 37797536 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02987 - - pvu:PHAVU_009G098900g 1079.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g02987 9 37792472 37797536 Viun9g02987 9 37792472 37797536 ECH