Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02939 ATGACCCCACTTCCACTGCAGTTGCCATCATCCATCACCCATCAACCCCAACTCAATCATTCACACTTTTCTTTATCTTCTCTTCTCTCCTCTCTTCTCTTCATTTCATCTCCTTCACTCTCTCTTGCACACAAAAACATCATGGTTTACTTCGAAGGAGAAAAGGAACACAAAGACCTTATCCCAGGTCTGCCAAACGAAATTGCAGAGCTCTGTCTCCTTCACGTTCCCTACCCCTACCAGGCTCTCTCACGTTCTGTTTCTTCCACCTGGAACAGAGCAATAACCCATCCCTCCTTTATCTTCTCAAAGAAAACTCTTTCCCACCCAAACCTCTTCGTTCTCGCCTTCCATTCCCAAACCGGAAAGCTTCAGTGGCAGGCACTTGATCCTTCCTCCGCCCGCTGGTTCCTTCTCCCACAAATGCCCTCGCCGGAGGAGGACGACGCCTGCCCGGCGCCACTCGCATGCGCGGCCCTGCCTCGCCAGGGGGAGCTCTTCGTCGTCAACGGAAGGGAGACGCTGGCATATCGCGCCGCCACGAACCAGTGGTCGGTGACTGGGGGTCCTGGGAGGAGGGAACTCGTGGCGGCGGTGGGAGTGGAGGGGAGGATAGTCGCGGTGGGGAGAGGTGGAACGGGTGTGTACGATCCTGAGAGCGACACATGGCAGGAGGGGAGTGAGTTGGGAGGGGAGCTGGAGAGGTATGAGGTTGTGGCGGCGGCGGGTAGAGTGTATGTGACGGAGGGGTGGTGGTGGCCGTTCATGTTCCGGCCGAGGGGTTGGGTGTATGAGGTGGAGAGGGACACGTGGCAGGAGATGAGAGTTGGAATGAGAGAGGGGTGGAGTGGGGTGGGTGTGGCTGTGGGTGAAAGAGTTTTTATGATCGCCGAGTATGGAGATTCGCCGGTGAAGGTATACGATGAGGAGCATGACACGTGGTATCCTGTGGGAGGTGGGAGATTTCCGAGAGAAGTTATGAAGAGACCCTTTTGTGCCACGGGGTTGGATGACAGAATCTACGTGGCATCTCGTGGGTTGAACGTGGCAATAGGAATTGTGGAGACGGTGCAAGATGTCAAAGGTTGTTCTGCTGACGTGTCTGTGACGTGGCAAGTGGTGGAGGCTCCGCGTGCTTTTCGCGAATTCTCACCTTGTAGTTGTCAAGTGCTGTATGCTTGA 1182 0.5533 MTPLPLQLPSSITHQPQLNHSHFSLSSLLSSLLFISSPSLSLAHKNIMVYFEGEKEHKDLIPGLPNEIAELCLLHVPYPYQALSRSVSSTWNRAITHPSFIFSKKTLSHPNLFVLAFHSQTGKLQWQALDPSSARWFLLPQMPSPEEDDACPAPLACAALPRQGELFVVNGRETLAYRAATNQWSVTGGPGRRELVAAVGVEGRIVAVGRGGTGVYDPESDTWQEGSELGGELERYEVVAAAGRVYVTEGWWWPFMFRPRGWVYEVERDTWQEMRVGMREGWSGVGVAVGERVFMIAEYGDSPVKVYDEEHDTWYPVGGGRFPREVMKRPFCATGLDDRIYVASRGLNVAIGIVETVQDVKGCSADVSVTWQVVEAPRAFREFSPCSCQVLYA 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02939 393 CDD F-box_AtAFR-like 60 100 - -
Viun9g02939 393 SMART fbox_2 64 104 IPR001810 GO:0005515
Viun9g02939 393 PANTHER OS02G0202900 PROTEIN 55 391 IPR045887 -
Viun9g02939 393 SUPERFAMILY Kelch motif 112 344 IPR015915 GO:0005515
Viun9g02939 393 Gene3D - 102 380 IPR015915 GO:0005515
Viun9g02939 393 SUPERFAMILY F-box domain 57 139 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02939 Viun-Chr9 37495393 37496836 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02939 - - vra:106761094 663.685