Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02872 ATGGGTTACATCCACTATGGAAGAAACGGTCTCCGCCACGTATTCAGATTCAAATCCTCCACCGGCGTCGTCACTAACTCCGCCAGATCGCAACCGAGGTCATGCGCTCCTCTCATCGGGAATGTTCATTTCTCCACCACTTCTGACTCCAGAATCGTGCAGGACCTTCTAGCGGAGGTGGAGCGCGACAGACTCAGGGAGCGAAACGAGCGATTGAGACTCGGTTTGGACACGGCGGACATCGACGCGGAGCCCGAGCAGGACTACATGGGCGTGGGGCCACTCATCGCGAAGCTGGAGAAGGAGAAGGAGAAGCAGAAGGGATCGGAGGACTTGAATCGCTACGAGGAGCCCACGGACTCCGATGACGATTCCGACGAGGAAACCCAGGACGACGCCGACAAACGGCACCGCGATTTCGAGCGCAAGTACGGGCGCCACAAGGACCTTCTCAAGAGCTTCACCGACGCCGAAACCCTCGATGAGGCCTTCAATTGCATGACCAAAATTGACAAGTTCGAGCACAAGCATTTCCGCCTACGTCCGGAATATAGGGTTATCGGCGAGCTCACGAACCGGCTTAAGGTGGCGACGGAGCAGAAGGATAGGTTTGTTCTGCAGAATAAGCTTAATAGGGCGTTGAGGTTGGTGCAGTGGAAGGAGGCCTATGATCCTGATAACCCTGCCAATTATGGTGTGATTCAGCGTGAGCAGCCGGATGCTGCTGCCGCCGCGGATGCGCGGGAAGAAGCTGAGTTGGAGAAGGAGAAGGAGGAGCTGATTGGGGAAGGGGATAATGCTGATGAGGAGGAGGAGGAGTTTGATGACATGAAGGAGAAGGATAATATACTGCTGGCAAAACTTGAGGCTATCGACAGGAAGCTTGAGGAAAAGCTGGCGGAGCTTGAATATACGTTTGGGAGGAAGGGGAAGGCACTGGAGGAAGAGATCAAGGATCTTGCTGAGGACAGAAATGAATTGACTGAGCAGAAGAGAAAGCCGCTTTACCGGAAGGGTTTTGATACAAGATTGATAGACATGAACCGAACTTGTAAAGTCACCAAGGGAGGACAAGTTGTGAAGTATACTGCCATGGTAGCTTGTGGAAACTATAATGGTGTTATTGGTTTTGCAAAAGCCAAAGGCCCTGCAGTCCCAGTTGCCCTTCAGAAGGCCTACGAGAAATGCTTTCAGAATTTGCATTATGTAGAGCGACATGAGGAGCATACAATTGCCCATGCAATTCAAACGTCTTATAAAAAGACCAAGGTGTATCTTTGGCCTGCTCCAACTACAACTGGTATGAAAGCTGGCAGAACAGTCGAATCCATACTTCACTTGGCTGGTTTAAAGAATGTCAAGTCGAAGGTCATTGGTTCCAGAAATCCTCATAATACAGTTAAAGCTGTCTTCAAAGCACTTAATGCGATTGAAACACCAAGGGATGTTCAAGAGAAGTTTGGCAGGACTGTGGTTGAGAAGTATCTGTTGTAA 1494 0.504 MGYIHYGRNGLRHVFRFKSSTGVVTNSARSQPRSCAPLIGNVHFSTTSDSRIVQDLLAEVERDRLRERNERLRLGLDTADIDAEPEQDYMGVGPLIAKLEKEKEKQKGSEDLNRYEEPTDSDDDSDEETQDDADKRHRDFERKYGRHKDLLKSFTDAETLDEAFNCMTKIDKFEHKHFRLRPEYRVIGELTNRLKVATEQKDRFVLQNKLNRALRLVQWKEAYDPDNPANYGVIQREQPDAAAAADAREEAELEKEKEELIGEGDNADEEEEEFDDMKEKDNILLAKLEAIDRKLEEKLAELEYTFGRKGKALEEEIKDLAEDRNELTEQKRKPLYRKGFDTRLIDMNRTCKVTKGGQVVKYTAMVACGNYNGVIGFAKAKGPAVPVALQKAYEKCFQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTTTGMKAGRTVESILHLAGLKNVKSKVIGSRNPHNTVKAVFKALNAIETPRDVQEKFGRTVVEKYLL 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02872 497 MobiDBLite consensus disorder prediction 250 276 - -
Viun9g02872 497 MobiDBLite consensus disorder prediction 100 140 - -
Viun9g02872 497 Pfam Ribosomal protein S5, C-terminal domain 419 486 IPR005324 GO:0003735|GO:0005840|GO:0006412
Viun9g02872 497 PANTHER RIBOSOMAL S SUBUNIT 122 493 IPR000851 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Viun9g02872 497 Pfam Ribosomal protein S5, N-terminal domain 340 404 IPR013810 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Viun9g02872 497 Coils Coil 243 273 - -
Viun9g02872 497 Gene3D - 405 494 IPR014721 -
Viun9g02872 497 MobiDBLite consensus disorder prediction 100 115 - -
Viun9g02872 497 SUPERFAMILY dsRNA-binding domain-like 335 405 - -
Viun9g02872 497 SUPERFAMILY Ribosomal protein S5 domain 2-like 409 487 IPR020568 -
Viun9g02872 497 FunFam 30S ribosomal protein S5 290 401 - -
Viun9g02872 497 Coils Coil 285 305 - -
Viun9g02872 497 Gene3D - 291 401 - -
Viun9g02872 497 Coils Coil 310 333 - -
Viun9g02872 497 ProSiteProfiles S5 double stranded RNA-binding domain profile. 340 403 IPR013810 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Viun9g02872 497 FunFam 30S ribosomal protein S5 405 496 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02872 K02988 - gmx:100800084 759.214