Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02852 ATGACGAATGGCTTCACGAGGGTTGGACACGGCACTGCACAGCGAAGGCAAACAAAGGATGTTGTTAAAGGTATAAAGAAGCGGCTTGGAAGTAAAGTTCCTAGAGTTCAAATAAGTGCATTAACTCTGCTGGAGACAATAATTAAGAATTGTGGAGACATTATTCACATGCATGTTGCCGAGAGAGATGTTCTTCATGAGATGGTTAAAATAGCGAAGAAAAAGACCAATTATCATGTCCGAGAGAAGATATTGGCTCTTATAGATAGTTGGCAAGAGGCTTTTGGAGGGCCAAGATCAAGATATCCACAGTATTATGCAGCATACCAGGAGCTTGTGCGTGCTGGGGCAGTATTCCCCCATAGGTCTGAGCGATCTGCACCTGTATTCACACCTCTACAAACACAACCATTGTCATCATACCCTCAAAATATACGAGATACTTTTGCTCAACAAGACACAGCTGAGTCCTCTGCAGATTCTGAGTTTCCAGCCCTAAGTTTGTCAGAAATTCAAAATGCACGTGGTATTATGGATGTTCTAGCAGAAATGCTCAATGCATTGGACCCTGGTAACAAAGAAGGTCTTCAGCAGGAAGTTATTGTTGATTTAGTGGAGCAATGTCGAACATACAAACAGAGAGTGGTACACCTTGTTAATTCAACTTCGGACGAATCATTGCTATGCCAAGGCCTATCGCTGAATGATGATCTTCAGCGTGTCCTGGCCAAGCATGAATCCATTGCTTCAGGAACTTCTGCTGCAGGAACTTCTACTTCAGGAACTTCTGCTTCAGGAACTCCTGCTCAAAATCATACTGAGAATCTGAAGACTGCACCTACTGGAGCAGTTGCAGATTTTGGTCCTTTGGTTGATTTTGGAGATTCCAGTAAACAGACGGATGGAAGGTCGTCTGCTAATGCTGAAACTGGGTCTCAATCGTTGAACCAGTTACTGCTTCCAGCGCCCCCAACATCAAATGAATCAGCTCCCCCGGCGAAGGTTGATCCTAAAGTGGACCTGCTCAGTGGTGACGACTATAACTCACCAAAAGCAGAGACTTCACTTGCTCTCGTCCCTTTAGGCGAACAGCCGCCAGCCAGCCCCAGCCCTAGCCCTATGTCTCAACAGAATGCCCTTGTTCTTTTTGATATGTTTTCTAATGGAAGCAATAATCTCCAGCCAATTAATGTTGCCGGTCAAACCAGTCCATTTTCTCCTCAATGTCAACAGCAGCAGACTTTCATATCTCAAGGGCTGTTTTACCCCAATGGAGGTGGGCCAAATGTTGGATCGCCTCGGTTTGAGCAATCACCTTATATGCAGAGCACAGGTCCTTCTTGGAATGGTCAGGTTGCGCAGCAGCAACAGTCTCCTTCTCCAGTTCACGGTACACCAAATGGTGGATCATTTCCGCCACCTCCGTGGGAAGCACAACCCACAGACAATGATAGTCCAGTAGTAGTAGGCAGTCAATACCCACAACAACCAATGCAAGTGACTCAAGTGGTAATGACCCATATACATAGTGCTGCACATCCTCAGGGACCTCAAGCTGCTGCGCATGACCAGGCTGTTGGAATGTATATGCAGCCAAATGCTAGCCATATCTCAACAATCAACAACAATGTTCAAAGTAATCAATCAGGCTTATACCCGCAGCATATTCAGGGTGTTCCCAGTCCTTACATGGGTATGGGTATGGGTATGGCTTCACATCCAATGCATTCCATGTATCCTCAACAAATGTATGGCAACCAATTCGTAGGATATGGCTATGGTCAGCAACCAGCGGTTCAATTTGTTGAGCAGCAAATGTATGGTTTATCAATGAGAGATGATGGTGCTCTGAGAAATTCTTACCAGGTTTCTTCTACATCCTATGTGCCACCTGGGAAGCCTTCCAAACCAGAGGATAATTTATTTGGGGACCTTGTTAACATGGCAAAAGTGAAACCAAAACCTACTGGTGGCATGTAA 1980 0.4525 MTNGFTRVGHGTAQRRQTKDVVKGIKKRLGSKVPRVQISALTLLETIIKNCGDIIHMHVAERDVLHEMVKIAKKKTNYHVREKILALIDSWQEAFGGPRSRYPQYYAAYQELVRAGAVFPHRSERSAPVFTPLQTQPLSSYPQNIRDTFAQQDTAESSADSEFPALSLSEIQNARGIMDVLAEMLNALDPGNKEGLQQEVIVDLVEQCRTYKQRVVHLVNSTSDESLLCQGLSLNDDLQRVLAKHESIASGTSAAGTSTSGTSASGTPAQNHTENLKTAPTGAVADFGPLVDFGDSSKQTDGRSSANAETGSQSLNQLLLPAPPTSNESAPPAKVDPKVDLLSGDDYNSPKAETSLALVPLGEQPPASPSPSPMSQQNALVLFDMFSNGSNNLQPINVAGQTSPFSPQCQQQQTFISQGLFYPNGGGPNVGSPRFEQSPYMQSTGPSWNGQVAQQQQSPSPVHGTPNGGSFPPPPWEAQPTDNDSPVVVGSQYPQQPMQVTQVVMTHIHSAAHPQGPQAAAHDQAVGMYMQPNASHISTINNNVQSNQSGLYPQHIQGVPSPYMGMGMGMASHPMHSMYPQQMYGNQFVGYGYGQQPAVQFVEQQMYGLSMRDDGALRNSYQVSSTSYVPPGKPSKPEDNLFGDLVNMAKVKPKPTGGM 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02852 659 SMART VHS_2 2 116 IPR002014 GO:0035091|GO:0043130
Viun9g02852 659 SUPERFAMILY ENTH/VHS domain 15 121 IPR008942 -
Viun9g02852 659 CDD VHS 13 114 - -
Viun9g02852 659 ProSiteProfiles VHS domain profile. 1 120 IPR002014 GO:0035091|GO:0043130
Viun9g02852 659 MobiDBLite consensus disorder prediction 1 20 - -
Viun9g02852 659 MobiDBLite consensus disorder prediction 297 324 - -
Viun9g02852 659 Gene3D - 11 130 IPR008942 -
Viun9g02852 659 PANTHER TOM1-LIKE PROTEIN 15 654 IPR044836 GO:0035091|GO:0043130|GO:0043328
Viun9g02852 659 Pfam GAT domain 176 250 IPR004152 GO:0035091|GO:0043130
Viun9g02852 659 ProSiteProfiles GAT domain profile. 162 250 IPR004152 GO:0035091|GO:0043130
Viun9g02852 659 FunFam TOM1-like protein 2 164 254 - -
Viun9g02852 659 Pfam VHS domain 15 113 IPR002014 GO:0035091|GO:0043130
Viun9g02852 659 Gene3D - 164 258 IPR038425 -
Viun9g02852 659 MobiDBLite consensus disorder prediction 424 489 - -
Viun9g02852 659 MobiDBLite consensus disorder prediction 435 465 - -
Viun9g02852 659 MobiDBLite consensus disorder prediction 248 351 - -
Viun9g02852 659 CDD GAT_GGA-like_plant 170 248 - -
Viun9g02852 659 MobiDBLite consensus disorder prediction 250 278 - -
Viun9g02852 659 MobiDBLite consensus disorder prediction 466 480 - -
Viun9g02852 659 SUPERFAMILY GAT-like domain 124 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02852 Viun-Chr9 36987531 36995317 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02852 - - gmx:100805762 988.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g02852 9 36987531 36995317 Viun9g02852 9 36987531 36995317 ECH