Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02823 ATGAGCCCGAGAGCTTCTAACTCTAAATGCTCAGTCCATCAACTGGAGAACATAGATGAGAATGCTCCTGCAGATTGGACTGCATCATCCTGTCCCCCACCTGATACTCCAACTGAGTCTATGGAGTTCCTTGCTAGATCATGGAGTCTTTCAGCCATGGAACTCTCTAAAGCATTGCACAACACCAACATTGCGATCTCCACCAGTATGGACATGCCACTTTCTTGTCCTTCTGGTCACCAATTTGATACCAAGAGTTCCACTGCTTCAAAGGATTTATCTAACTGCTGTTATCCTCCAATTTCACCGAGTGACAGTAGCGAAAAGAAGCTTTACAGAAGCTTGCTAAGAGGGAGGACAATGGGTAGGTGGTTGAAAGATCAAAAGGAGAGGAAAAAGCAGGAAATTAGGACACATAACGCTCATTTGCATGCTGCAGTATCTGTGGCTGGTGTTGCTGCTGCTATTGCAGCGGTTGCAGCATCAACAGCATCACCTGAAATGCCTTATTCCAACCCAAAGAACCCTCCTCCCCTGGCTTCTGCTGCAATTGCATCTGCAGCAGCTTTAGTAGCCTCTCACTGCATTGAGATTGCAGAAGATATGGGAGCTGAACATGACCAAATCTTAACAGTAGTCAACTCCGCCATTAATGCCAAAACCAATGGAGATATTATGACTTTAACAGCCGGGGCAGCCACAGCGTTGCGAGGAGCTGCTACTCTAAAGGCAAGGCTGCAAAAGGGGCCTGGAGCAACTGCCATTCCTCTAGTTGAGGAAAAGTGTAATGAAAGCAAAGAAGCAAACATCTTGACAGCACTGGACTATGTTTTTAAAGGAGGAGAACTTCTCAAACGTACAAGAAAAGGAGATCTTCACTGGAAGCAAGTCTCTTTCAATATAAATTCAAATTTGCAGGTTGTAGTCAAAATGAAAAGCAAACATATGGCAGGAACATTCACAAAAAAGAAGAAATATATAGTGACCGGTCTTTGCAATGATACCCCAGCATGGCCTGGAAGGGAGAGAGAAGACACCAATGAAAAGAGGGCATATTTTGGAATAAAAACAACAGACAGGACTATAGAATTTGAATGTGGAAGTAAAGGAGACAAACAGTTCTGGCTTGAGGGTATCCAGTACATGTTGAATTGCCGTGTCAAAGTAACATTATGA 1176 0.4388 MSPRASNSKCSVHQLENIDENAPADWTASSCPPPDTPTESMEFLARSWSLSAMELSKALHNTNIAISTSMDMPLSCPSGHQFDTKSSTASKDLSNCCYPPISPSDSSEKKLYRSLLRGRTMGRWLKDQKERKKQEIRTHNAHLHAAVSVAGVAAAIAAVAASTASPEMPYSNPKNPPPLASAAIASAAALVASHCIEIAEDMGAEHDQILTVVNSAINAKTNGDIMTLTAGAATALRGAATLKARLQKGPGATAIPLVEEKCNESKEANILTALDYVFKGGELLKRTRKGDLHWKQVSFNINSNLQVVVKMKSKHMAGTFTKKKKYIVTGLCNDTPAWPGREREDTNEKRAYFGIKTTDRTIEFECGSKGDKQFWLEGIQYMLNCRVKVTL 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02823 391 ProSiteProfiles PH domain profile. 276 384 IPR001849 -
Viun9g02823 391 Pfam Auxin canalisation 34 255 IPR008546 -
Viun9g02823 391 PANTHER EXPRESSED PROTEIN 25 386 IPR040269 -
Viun9g02823 391 SUPERFAMILY PH domain-like 266 382 - -
Viun9g02823 391 Gene3D - 258 389 IPR011993 -
Viun9g02823 391 Pfam Plant pleckstrin homology-like region 282 385 IPR013666 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02823 Viun-Chr9 36827886 36831662 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02823 - - gmx:100814154 654.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g02823 9 36827886 36831662 Viun9g02823 9 36827886 36831662 ECH