Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02782 ATGGATGACGACGAGAGAGAGAGGTTACTGGAGAGGGAGAGATTGCAAATCCAGATGATTCGCCAGCTCGATCTCGAGCACCTTGAAGTTGAAGAAGTCGATTACTCCGATGAAGACGAAGACGCCGACACCGAGGTGGACTCGGATTATGCGATTTTACTTTCACAATTAAATTCGCCCAGCTCTCCTCACTCTTCTGCTGAATTCACTTTTGACACCTATATCACGCCGTTGCATACGTATCTCGGTGACGTCGAAGACACGCGCCACAGGACTGCGTTCTTGGACGGTGGAGCTGTATTGAACATTCCGCTCTTTTGTCTCCGAGGAGTCGTACCCTTTCCCGGGGCTACACTTCCCCTTAGAGTTATTGAACCTCGTTTGGTGGCTGCTGTGGAGAGAGCACTAACTCAAGATGATATTCCTCATACCATTGGTGTGATTCGAATCCACAGGGATACTGCAACACATAGGACGAAATCAGCAAGCGTTGGGACAACTGCAGAGATTCGACAATTTGGGCGTCTTGGGGATGGTTCACTGAATGTAGTTACCCGTGGACAACAACGATTTCGCCTAAGACGGTCCTGGAATGATGTGGACGGAGTGCCTTATGGAGAGATCCAAATTATTGAGGAAGATCTTCCAGTGAGAATTCCAAGAGATGCTTTTGGCAAATTAGCACCATTGAGTAACATGCCCTGTAGTCAAGCTGTCTCACATTCGGTGTCTTCACCATATTCTCATACTAAAATGCAAAGGTCAAAAAATGAGGAAAGTGATTCAGAACCAAATTCAGAAGACAGTTTTGAGAATGAACTCTCACCGGTGGAAAGGAAAATCCATCTATCAGTTGTTGGCTCCAGCTATGTAGATGATACAATGGATGAATCAGCAAACAGCTGCAACCCTAAATTCATGTGTAAGTCAGATCAGGAAACTAGATCCAATCTGGATTCAAGGATTGGGAATTGTTCCACTTCTGGAAAGCAGTCATGGAATGAAGAGCTTAATAGATGTAAAAATATATGTGCCTACACATCTCATAAAATTTCAAAAGCATTTTGGCCCCACTGGACATATCGGATGTTTGACTCTTATTTGCTGGCACAGAGGGCTGCAGATATGTGGAAGCGAATAGTTGGGGTGCCTAACATGGAAAGTCTCGTTCAGAAGCCTGATGTTTTATCATTTCACATAGCTAGTAAAATACCTGTGTCTGAGTCTACAAGGCAGGAGCTTTTGGATATCGATGGCATTGCTTACAGATTGCGTAGGGAAATTGAATTACTAGAGAGCATTGATCTTATCCGGTGTAAAAGCTGTGAGACTACGATTGCAAAACGAAGTGATATGTTGGTGATGTCGAGTGAGGGTCCTCTTAGTGCTTATGTGAATCCAGGTGGTTATGTGCATGAGATAATGACTCTTTACAAGGCAAATGGTTTATCTCTTCTTGGACCAGCAGTGGCTGAATACAGTTGGTTTCCTGGGTATGCATGGACAATTGCTATTTGTGCTACGTGTAAAACTCAAATGGGGTGGCTTTTCACGGCCAGGAGCCAAAAACTAAAGCCCAGCACTTTCTGGGGGATTCGGAGCTGTCAACTTGCAGAAGAAAAAACGCGAAAACCTGTAGTTTGA 1644 0.4453 MDDDERERLLERERLQIQMIRQLDLEHLEVEEVDYSDEDEDADTEVDSDYAILLSQLNSPSSPHSSAEFTFDTYITPLHTYLGDVEDTRHRTAFLDGGAVLNIPLFCLRGVVPFPGATLPLRVIEPRLVAAVERALTQDDIPHTIGVIRIHRDTATHRTKSASVGTTAEIRQFGRLGDGSLNVVTRGQQRFRLRRSWNDVDGVPYGEIQIIEEDLPVRIPRDAFGKLAPLSNMPCSQAVSHSVSSPYSHTKMQRSKNEESDSEPNSEDSFENELSPVERKIHLSVVGSSYVDDTMDESANSCNPKFMCKSDQETRSNLDSRIGNCSTSGKQSWNEELNRCKNICAYTSHKISKAFWPHWTYRMFDSYLLAQRAADMWKRIVGVPNMESLVQKPDVLSFHIASKIPVSESTRQELLDIDGIAYRLRREIELLESIDLIRCKSCETTIAKRSDMLVMSSEGPLSAYVNPGGYVHEIMTLYKANGLSLLGPAVAEYSWFPGYAWTIAICATCKTQMGWLFTARSQKLKPSTFWGIRSCQLAEEKTRKPVV 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02782 547 ProSiteProfiles CULT domain profile. 434 541 IPR034750 -
Viun9g02782 547 MobiDBLite consensus disorder prediction 238 274 - -
Viun9g02782 547 FunFam ATP-dependent protease La domain-containing protein 83 211 - -
Viun9g02782 547 Pfam ATP-dependent protease La (LON) substrate-binding domain 102 432 IPR003111 -
Viun9g02782 547 SUPERFAMILY PUA domain-like 102 432 IPR015947 -
Viun9g02782 547 Gene3D - 83 211 IPR046336 -
Viun9g02782 547 ProSiteProfiles Lon N-terminal domain profile. 103 433 IPR003111 -
Viun9g02782 547 PANTHER CEREBLON 45 535 - -
Viun9g02782 547 CDD CRBN_C_like 437 533 IPR034750 -
Viun9g02782 547 Gene3D - 365 429 - -
Viun9g02782 547 Gene3D Peptide methionine sulfoxide reductase. 430 546 - -
Viun9g02782 547 FunFam Lon protease homolog 365 429 - -
Viun9g02782 547 SMART lon_5 102 433 IPR003111 -
Viun9g02782 547 FunFam Blast:Protein cereblon homolog 430 545 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02782 K11793 - gmx:100779918 775.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g02782 9 36512279 36517230 Viun9g02782 9 36512279 36517230 ECH