Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02770 ATGGCGTCCAGCGATTCCGATTCGCAGTCGAAGATCGTCCATGGCGACGCTGGTTACATTCTCGAAGACGTTCCTCATTTCACCGACTACATTCTAAATCTTCATACGTATCCGAATCCGCTTCGGTCCAATCCTGCTTACTCGGTTGTCAAGCAGTATTTCGTGCATATGGACGACACTGTGCCTCAGAAGGTTGTTGTTCACAAGGATGGTCCAAGAGGTGTACATTTTAGACGTGCAGGCCCTCGACAAAAGGTATACTTTAGATCGGATGATGTGCACGCATGCATTGTCACTTGCGGCGGACTTTGCCCTGGCCTCAACACTGTCATAAGGGAAATTGTCTGTGGTCTTTCTTACATGTATGGTGTTAACAAAGTCCTTGGCATAGATGGAGGTTATAGAGGTTTTTATTCCAAGAACACCATAACTTTAACACCTAAGGTGGTCAATGACATCCATAAGCGTGGAGGTACAATTCTTGGGACGTCACGAGGGGGGCATGATACCAGCAAGATAGTTGACAGCATCCAGGATCGAGGAATTAATCAGGTTTATATTATTGGAGGAGATGGTACCCAGAGAGGAGCTACTGTGATTTACGAGGAAGTTAGACGACGGGGTCTGAAAGTAGCAATTGCTGGAATTCCCAAAACCATAGATAATGACATTCCGGTTATTGACAAATCCTTTGGTTTTGATACTGCGGTCGAGGAGGCTCAACGTGCCATCAATGCAGCACATGTTGAAGCTGAAAGTATTGAGAATGGCATTGGTGTTGTAAAGCTAATGGGACGTTATAGTGGCTTTATTGCTATGTATGCTACTCTTGCTAGCAGAGATGTGGACTGTTGCTTGATTCCAGAGTCACCCTTCTACCTTGAAGGAAAGGGTGGACTTTTTGAATTTATTGAGAAAAGACTGAAAGAAAATGGGCATATGGTCATAGTCATAGCGGAGGGAGCAGGACAAGATCTTCTTACTGAAAGCATGCAAGACATGGACCAGAAAGATGCTTCTGGAAACAAACTACTTCAAGATGTTGGTTTATGGATATCTCATAAGATCAAGGACCACTTTGCAAGGAAGGATAAGATTGCCATCAATCTTAAATATATAGATCCAACCTACATGATCCGAGCAATTCCAAGCAATGCATCAGATAATGTCTACTGTACACTTCTTGCTCAGAGTGCAGTCCATGGTGCAATGGCAGGGTATACCGGATTTACAGTTGGACTGGTCAATGGCAGACATACTTATATCCCATTCAATAGAATCAATGAGAGGCAGAACAAGGTTGTGATTACTGACAGAATGTGGGCAAGACTCCTTTCTTCCACCAACCAGCCAAGCTTTTTGAGCCCGAAAGATTTAGATGAAGCCAAGAAAGCAGAACAACCTCCGAGTCAATTGTTAGAAGAGAGCAATTGCAATGATATTGGTGAAGCTGAGAAAAAAGAAAACACTTTCAGTCAATTGTTACAAGGGGACAATTTCAAAGATGAACAACAATCTGAAAACCATGCAGACAATGGTATCGAGACAAAAAATTAG 1557 0.431 MASSDSDSQSKIVHGDAGYILEDVPHFTDYILNLHTYPNPLRSNPAYSVVKQYFVHMDDTVPQKVVVHKDGPRGVHFRRAGPRQKVYFRSDDVHACIVTCGGLCPGLNTVIREIVCGLSYMYGVNKVLGIDGGYRGFYSKNTITLTPKVVNDIHKRGGTILGTSRGGHDTSKIVDSIQDRGINQVYIIGGDGTQRGATVIYEEVRRRGLKVAIAGIPKTIDNDIPVIDKSFGFDTAVEEAQRAINAAHVEAESIENGIGVVKLMGRYSGFIAMYATLASRDVDCCLIPESPFYLEGKGGLFEFIEKRLKENGHMVIVIAEGAGQDLLTESMQDMDQKDASGNKLLQDVGLWISHKIKDHFARKDKIAINLKYIDPTYMIRAIPSNASDNVYCTLLAQSAVHGAMAGYTGFTVGLVNGRHTYIPFNRINERQNKVVITDRMWARLLSSTNQPSFLSPKDLDEAKKAEQPPSQLLEESNCNDIGEAEKKENTFSQLLQGDNFKDEQQSENHADNGIETKN 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02770 518 Hamap ATP-dependent 6-phosphofructokinase [pfkA]. 24 454 IPR012004 GO:0003872|GO:0005524|GO:0006096
Viun9g02770 518 PIRSF ATP_PFK_TP0108 1 458 IPR012004 GO:0003872|GO:0005524|GO:0006096
Viun9g02770 518 MobiDBLite consensus disorder prediction 496 518 - -
Viun9g02770 518 FunFam ATP-dependent 6-phosphofructokinase 89 279 - -
Viun9g02770 518 FunFam Phosphofructokinase 233 391 - -
Viun9g02770 518 SUPERFAMILY Phosphofructokinase 28 461 IPR035966 GO:0003872|GO:0006096
Viun9g02770 518 Gene3D - 90 279 - -
Viun9g02770 518 Pfam Phosphofructokinase 96 401 IPR000023 GO:0003872|GO:0006096
Viun9g02770 518 MobiDBLite consensus disorder prediction 502 518 - -
Viun9g02770 518 PRINTS ATP-dependent phosphofructokinase family signature 214 231 IPR022953 GO:0003872|GO:0006002|GO:0006096
Viun9g02770 518 PRINTS ATP-dependent phosphofructokinase family signature 97 116 IPR022953 GO:0003872|GO:0006002|GO:0006096
Viun9g02770 518 PRINTS ATP-dependent phosphofructokinase family signature 253 269 IPR022953 GO:0003872|GO:0006002|GO:0006096
Viun9g02770 518 PRINTS ATP-dependent phosphofructokinase family signature 310 322 IPR022953 GO:0003872|GO:0006002|GO:0006096
Viun9g02770 518 PRINTS ATP-dependent phosphofructokinase family signature 232 250 IPR022953 GO:0003872|GO:0006002|GO:0006096
Viun9g02770 518 PRINTS ATP-dependent phosphofructokinase family signature 181 197 IPR022953 GO:0003872|GO:0006002|GO:0006096
Viun9g02770 518 MobiDBLite consensus disorder prediction 452 477 - -
Viun9g02770 518 Coils Coil 237 257 - -
Viun9g02770 518 PANTHER ATP-DEPENDENT 6-PHOSPHOFRUCTOKINASE 1 5 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02770 Viun-Chr9 36444833 36452946 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02770 K00850 - gmx:100818755 965.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g02770 9 36444833 36452946 Viun9g02770 9 36444833 36452946 ECH