Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02700 ATGCATGTCACCGGGGATCTAGGGTTTTCGAGCCTGGTCCTTCTGGTGGTTTGTCTGGTGGTGCCGGTGATCGGCCTCGTAATTAGCCGTAGATGGCAGGTTTCGGAGGCTAAAAAGGAGGAGATCAGGAGACTTCTGGTTTTGGCAGCGGAGGAAACTGCCAGGGCTGAGAAAGAGGCATTCTATGGGTACGGCACGGCAGCTACTACTGCTCCGAGCAATCAATGTGCCGTGTGCTATTTCCCTGCCACCGCGCGCTGCGCTCAGTGCAAATCAGTTCGCTACTGTTCTTTTGAGTGTCAAACTGTTCATTGGCGGCAAGGTCACAAGTTAGAATGCAATCCTTCCAGCACAAGCCACCAGAGTTATGATGTAACAAGTGATCTTGGCAGCAAGGTGATAGAACAAGGCTACTCTGGAATATATGGTGAGAAGTCAGAAAGTGAAAGTACAGAATGTAAATCATCCTCTGAAAAGCCTTCGATTTCTGATATCTGCTTTTCTCCCAAAGTTTCATCTCAGAAGGATGAAAATATCAGATTTGAGTCCCTTACAGAGGGGAATATAACAGATTCTAATTCGGAATTGTCCAGTAATTCATTTTCTGGATTCTCAGCTTCCACAGGTTCCAGTGATTCTTCTGATGATTCCTCTGTCTGTGAGAGTGTCATTTCAAATGAGCATGACAGATCAGAGGGACATATTTTTGTTGATTCCACCCTTGACAATCCTGACAAAACTAATGACAATAGCGAGGGGGTAACCATGTCTTCTTCACCGAAGTTTGCTACTTTGGTTGATTCAATAGATGGTTTTTCTACAATGCATAAATTAAATCATATCGGACCTGGTTTTAGTAAAGAAGAGAGGAAGTTTGCATCAAATGGTAATTCAGGTTCAGATGTGTATAAGGAGAAAACACTTGATCCTTCTACAGTGTTTTCTGGGTTCTGGGATAAAGCACTAGATGGGATTAAAGATGATTCTAAGAATGACACTCATACATCTTATTCTGATGAATCAACGGGTAAAAGGACTGTTTCTGAATCTTCATTTCACTTTTCATTCAGTACCATTCCTCCTGCACATGTACGAGATATCAGGACAAAGGGTTCTGAATCTGATAATGCATTTCCAAATTGTATTGGGTCTGAGAATGACAACATGAACTCTTCAAAGGAGAGGAAATTCTTGTTCTCCAACAGCAAAGTTTCCAATGATCGGAATTATGTTACTCTAAGTGGTTCTGAATCTGATCATTTGGAATCGAAAGACAGCTCCAGACCACCTTTATCATCTTTCTCCCATCAATCCTCCAGTGCTGGCAAAGGTTCAGTTTGTGCAGATGCTTTGAGCATCCATAACTTTCAAGCGACTGGCACTAAGGTAACAAATCATGTTGTGGAAAACCGTCGCAGCACCTTCAAGTCCACTGCGATTAAGCATGACCGTGCTGATTCTAATATAGCTTCTGAAACTAAAGAAAATTCTCATACTGGTACAAAACACGGGAATAATGACGATGAATATGGCACTCAGGCTGTCACTTCCTCTCGTGTTCCTAGCTGTTCTGCAAATTCTAGAAGTGGTATAAAAACCTCTGTTTTGAAAGTTGTTGATCAGTTTAGAGGATCAAATATGTCAAAGCACTTTCCATTCTCTGTTGGGAGTGAGGTTGGTGAAAGACACCATGACAAGGTTTTTTTTCCTTATGAATTATTTGTCAAGCTTTATAACTCGAACAAGGTGGAGTTATGCCCATTTGGCCTTATAAATTGTGGAAACAGTTGTTATGCTAATGCTATACTTCAGTGCTTAGCATTTACGCCGCCTCTGACTGCTTATTTGCTTCAAGGATTACATTCTAAATCATGTGTAAATAAAAAATGGTGTTTCACCTGCGAATTTGAAAGATTGATTTTGAAGTCAAAGGACACAAAATCTTCGGTGTCTCCTATGTGCATAATCTCTCATTTACAGAATATTGGAAGTCAGCTTAGTAATGGGAGAGAAGAAGATGCACATGAATTTCTTAGGCATGTTATTGATACAATGCAATCTGTTTGCCTTATGGAAGCTGGGGTTAATGCATCGGGCTCCTTAGAAGAGGACACTACTTTAATGGGTCTAACATTTGGTGGTTACCTTCGATCAAAGATAAAATGCATGAAATGTGGAGGGAAGTCTGAGCGTCAAGAAAGGATGATGGATCTGACTGTTGAGATAGAAGGGGATATAACAACCCTGGTGGAGGCTCTTCAACGGTTTACAAGCACTGAGACTCTGGATGGGGAAAACAAGTACCACTGTGTCAGATGTAAGTCTTATGAGAAGGCCAAGAAGAAGCTGACAGTTTCAGAGGCACCCAATGTTCTTACTGTTGCATTAAAGAGATTTCAGTCTGGGAAATTTGGGAAGCTCAACAAGCCTATTCAATTTCCTGAAATACTTAACTTGGCACCTTTCATGAGTGGGACTAGTGATAAATCACCCATATACAGATTGTATGGGGTAGTTGTTCACTTAGATACCATGAATGCTGCCTTTTCGGGTCATTACGTGTGCTATGTGAAGAATATACAAAACAAGTGGTTCAAGGTTGATGACAGTGTGGTGACTGCTGTTGAATTGGAGAGAGTCTTGACAACAGGAGCATATATGCTTTTATATGCAAGGTGCTCGCCTAGGGCTCCAAGATTAATCAGGAACAGAATACTATCCTCAGATTCAAAAAGTAAAGTCAGCGGAAAAACTCTTGCAACGAAAGCAAGATATACATCTACGAATTCTGGTGTTTCTGAACATGTCAACAGTTCCATCTCTCCGGATGGCTCACCTGCATTCGATTCTTTCTATTCAAAGTTTCACCACCTGAAAAAGATTTTAGAGGAAGACTCGTCCAGTGATAATTCATCCCTCATTAGCAGCAATTCCGATGAAGGTTCTTGCAGTACTGATAGCACCTGTGATTCAGCCAGTACAGATGACTTCACAGATTATCTTTTTGGTGATTCAGGAAATGGGTGGAGTAGTGTGTGGAGGAATTCTGATTCTGACACATCCTCGTCCTCCTCATCTTCCCCCTTAAACTCTCGACATTCCCCACTCTCTGATATGGACCGATACGATTCAGTTTCTCCTACTGCTATTCCCACAGGTTCAAGAGTGGAGAAAGACAGTCATGTATACAGAAATGGAGCGGTGAGTGTTGATCGGAGAGGGGTGGGTGTTTCTTGTTTGCATTCTAACACAAGTTCACAGCATAGAGGGTTAGGTAGTGGTAGGATTAGTAGCAAGATTAGTAGTAGGGAAACTCACTCTTTTGTGAAAGTAGGATCTAACCTTTGTAATGATACAGAATGTGGTGTATTATGTAGAAAGTATAGAACGGATTAA 3396 0.4146 MHVTGDLGFSSLVLLVVCLVVPVIGLVISRRWQVSEAKKEEIRRLLVLAAEETARAEKEAFYGYGTAATTAPSNQCAVCYFPATARCAQCKSVRYCSFECQTVHWRQGHKLECNPSSTSHQSYDVTSDLGSKVIEQGYSGIYGEKSESESTECKSSSEKPSISDICFSPKVSSQKDENIRFESLTEGNITDSNSELSSNSFSGFSASTGSSDSSDDSSVCESVISNEHDRSEGHIFVDSTLDNPDKTNDNSEGVTMSSSPKFATLVDSIDGFSTMHKLNHIGPGFSKEERKFASNGNSGSDVYKEKTLDPSTVFSGFWDKALDGIKDDSKNDTHTSYSDESTGKRTVSESSFHFSFSTIPPAHVRDIRTKGSESDNAFPNCIGSENDNMNSSKERKFLFSNSKVSNDRNYVTLSGSESDHLESKDSSRPPLSSFSHQSSSAGKGSVCADALSIHNFQATGTKVTNHVVENRRSTFKSTAIKHDRADSNIASETKENSHTGTKHGNNDDEYGTQAVTSSRVPSCSANSRSGIKTSVLKVVDQFRGSNMSKHFPFSVGSEVGERHHDKVFFPYELFVKLYNSNKVELCPFGLINCGNSCYANAILQCLAFTPPLTAYLLQGLHSKSCVNKKWCFTCEFERLILKSKDTKSSVSPMCIISHLQNIGSQLSNGREEDAHEFLRHVIDTMQSVCLMEAGVNASGSLEEDTTLMGLTFGGYLRSKIKCMKCGGKSERQERMMDLTVEIEGDITTLVEALQRFTSTETLDGENKYHCVRCKSYEKAKKKLTVSEAPNVLTVALKRFQSGKFGKLNKPIQFPEILNLAPFMSGTSDKSPIYRLYGVVVHLDTMNAAFSGHYVCYVKNIQNKWFKVDDSVVTAVELERVLTTGAYMLLYARCSPRAPRLIRNRILSSDSKSKVSGKTLATKARYTSTNSGVSEHVNSSISPDGSPAFDSFYSKFHHLKKILEEDSSSDNSSLISSNSDEGSCSTDSTCDSASTDDFTDYLFGDSGNGWSSVWRNSDSDTSSSSSSSPLNSRHSPLSDMDRYDSVSPTAIPTGSRVEKDSHVYRNGAVSVDRRGVGVSCLHSNTSSQHRGLGSGRISSKISSRETHSFVKVGSNLCNDTECGVLCRKYRTD 1131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02700 1131 MobiDBLite consensus disorder prediction 222 236 - -
Viun9g02700 1131 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 588 893 IPR028889 -
Viun9g02700 1131 Pfam Ubiquitin carboxyl-terminal hydrolase 588 890 IPR001394 GO:0004843|GO:0016579
Viun9g02700 1131 MobiDBLite consensus disorder prediction 966 988 - -
Viun9g02700 1131 Pfam MYND finger 76 113 IPR002893 -
Viun9g02700 1131 MobiDBLite consensus disorder prediction 183 258 - -
Viun9g02700 1131 MobiDBLite consensus disorder prediction 373 389 - -
Viun9g02700 1131 Coils Coil 39 59 - -
Viun9g02700 1131 MobiDBLite consensus disorder prediction 475 505 - -
Viun9g02700 1131 MobiDBLite consensus disorder prediction 1015 1058 - -
Viun9g02700 1131 MobiDBLite consensus disorder prediction 241 258 - -
Viun9g02700 1131 FunFam Ubiquitin carboxyl-terminal hydrolase 15 67 117 - -
Viun9g02700 1131 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 378 896 - -
Viun9g02700 1131 MobiDBLite consensus disorder prediction 1015 1034 - -
Viun9g02700 1131 ProSitePatterns Zinc finger MYND-type signature. 76 113 IPR002893 -
Viun9g02700 1131 MobiDBLite consensus disorder prediction 409 439 - -
Viun9g02700 1131 Gene3D Cysteine proteinases 581 902 - -
Viun9g02700 1131 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 589 604 IPR018200 GO:0004843|GO:0006511
Viun9g02700 1131 ProSiteProfiles Zinc finger MYND-type profile. 76 113 IPR002893 -
Viun9g02700 1131 MobiDBLite consensus disorder prediction 149 168 - -
Viun9g02700 1131 MobiDBLite consensus disorder prediction 474 511 - -
Viun9g02700 1131 SUPERFAMILY HIT/MYND zinc finger-like 72 115 - -
Viun9g02700 1131 MobiDBLite consensus disorder prediction 183 221 - -
Viun9g02700 1131 FunFam Ubiquitin carboxyl-terminal hydrolase 15 582 901 - -
Viun9g02700 1131 Gene3D - 63 119 - -
Viun9g02700 1131 SUPERFAMILY Cysteine proteinases 584 895 IPR038765 -
Viun9g02700 1131 MobiDBLite consensus disorder prediction 370 389 - -
Viun9g02700 1131 MobiDBLite consensus disorder prediction 967 988 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02700 Viun-Chr9 35844319 35852563 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g02700 566 940 Miscellaneous Gene Families AT4G31670 48.936 8.17e-119 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02700 K11855 - gmx:100793079 1560.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g02700 9 35844319 35852563 Viun9g02700 9 35844319 35852563 ECH