Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02699 ATGGATGCTAAGTTGGGCATTGGGGTATTTTTGTGTGTAGTATGGGTGATGAGTGGCAATGCCACTGACCCATGTGGGGCTCAACCAGATGAGTCGGACCTCAACGTCATTCCGGTCTACAGCAAATGCTCACCGTTCAAGCCACCCAAGGTAGACTCGTGGGACACCAGGATCGTCGACATGGCCTCAAAAGACCCGCTCCGGGTCAGGTACCTCTCCACCTTATTGGGCCAGAAGACCGTCTCCGCCGCCCCAATCGCTTCCGGCCAAGCCTTCAACATCGGTAACTACGTCGTCAGGGCAAAACTCGGAACCCCCGGTCAACTTTTGTTCATGGTTTTGGACACCAGCACCGACGAGGCCTTCGTCCCATGCTCCGGCTGCACCGGCTGCTCCGACACCACCTTCTCCCCCAAAGCCTCCACCAGCTACGGCCCATTGGACTGCTCCGTACCCCAGTGCGGTCAGGTCCGCGGGCTCTCCTGCCCCGCCACAGGAACCGGCACCTGCTCCTTCAACCAAACCTACGCCGGCTCCTCTTTCTCCGCCACGCTCGTCCAAGACTCTCTCAGACTGGCCGCTGATGTTATCCCTAACTACTCCTTCGGCTGCGTCAACGCCATCTCCGGGGCCTCAGTTCCAGCCCAAGGGCTTTTGGGTCTGGGTCGCGGCCCACTGTCGCTTCTCTCCCAGTCCGGGACAAACTACTCCGGTGTATTCTCTTACTGCCTTCCCAGCTTTAAATCGTACTACTTCTCCGGGTCGCTCAAACTCGGGCCCGTGGGCCAGCCCAAGAGCATCCGGACCACCCCGCTTCTGCGCAACCCCCACCGGCCCTCTCTTTACTACGTGAACTTCACCGGAATCAGCGTGGGGCGCGTGCTGGTGTCTTTCCCCAGCGAGTATCTCGAGTTTAACCCGTATACCGGATCCGGAACCATAATTGATTCTGGCACGGTGATCACCCGGTTCGTGGAGCCCGTGTACAACGCGGTGAGGGAGGAGTTCAGGAAGCAGGTGGGAGGCACGTTCTCGAGCATTGGAGCTTTCGACACGTGTTTTGTGAAGACGTACGAAAATCTGGCACCGCCAGTTACCCTTCACTTCGAGGGATTGGACCTGAAGCTGCCATTGGAAAACAGCTTGATTCACAGCAGTGCCGGGTCGCTGGCCTGTCTTGCGATGGCGGCGGCGCCGGATAACGTGAACTCGGTGTTGAACGTGATTGCGAACTTTCAGCAACAGAATCTTAGGATTTTGTTTGATACCGTGAATAATAAGGTTGGCATAGCCCGTGAGGTTTGTAACTAA 1311 0.5728 MDAKLGIGVFLCVVWVMSGNATDPCGAQPDESDLNVIPVYSKCSPFKPPKVDSWDTRIVDMASKDPLRVRYLSTLLGQKTVSAAPIASGQAFNIGNYVVRAKLGTPGQLLFMVLDTSTDEAFVPCSGCTGCSDTTFSPKASTSYGPLDCSVPQCGQVRGLSCPATGTGTCSFNQTYAGSSFSATLVQDSLRLAADVIPNYSFGCVNAISGASVPAQGLLGLGRGPLSLLSQSGTNYSGVFSYCLPSFKSYYFSGSLKLGPVGQPKSIRTTPLLRNPHRPSLYYVNFTGISVGRVLVSFPSEYLEFNPYTGSGTIIDSGTVITRFVEPVYNAVREEFRKQVGGTFSSIGAFDTCFVKTYENLAPPVTLHFEGLDLKLPLENSLIHSSAGSLACLAMAAAPDNVNSVLNVIANFQQQNLRILFDTVNNKVGIAREVCN 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02699 436 Pfam Xylanase inhibitor N-terminal 97 259 IPR032861 -
Viun9g02699 436 Gene3D Acid Proteases 76 259 IPR021109 -
Viun9g02699 436 FunFam aspartyl protease AED3 76 259 - -
Viun9g02699 436 ProSiteProfiles Peptidase family A1 domain profile. 97 431 IPR033121 -
Viun9g02699 436 SUPERFAMILY Acid proteases 90 435 IPR021109 -
Viun9g02699 436 Pfam Xylanase inhibitor C-terminal 282 431 IPR032799 -
Viun9g02699 436 FunFam Aspartyl protease AED3 260 436 - -
Viun9g02699 436 Gene3D Acid Proteases 260 436 IPR021109 -
Viun9g02699 436 PANTHER ASPARTYL PROTEASES 9 429 IPR001461 GO:0004190|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02699 Viun-Chr9 35827069 35828692 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g02699 87 436 Miscellaneous Gene Families AT1G77480 26.598 7.61e-14 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02699 - - gmx:100816307 775.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g02699 9 35827069 35828692 Viun9g02699 9 35827069 35828692 ECH