Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02685 ATGCCATGCTCGAAGAGTCAAGAAATTGGCTGTAAGGTTGAAAATGGCAACCCTAATGTAGTATGGAGTGCTAGTGAAGATGGGACCTTGAGACAACATGATTTTCGGGAAGGTACCTCTTGTCCTCCAGCTGGGTCTTCACACCAAGAGTGTCGAAATATTCTTCTTGACTTACGAAGTGGTTCTAAAAGATCACTTGCTGATCCTCCTAAACAAGTCCTTTCTTTAAAGTCTTGTGATATTAGTTCAACTAGGCCGCATTTGCTCCTTGTTGGTGGGAGTGATGCCTTTGCACGCTTATATGATAGAAGGATGTTGCCACCTCTAAGCTCATGTCGAAAAAGAATGTCTCCTCCTCCTTGTGTTAATTATTTTTGTCCAATGCATCTTTCGGATCGTGGACATCCAAGCTTACACTTAACTCATGTTACATTCAGTCCTGATGGACATGAGGTTCTCCTCAGCTATAGTGGAGAGCATGCTTACCTGATGAATGTAAATCATGCTGGAGTGAATGAGATGCAATATACTTCAGGTGACGTATCAAAGATGATGACTTACTCTCCGATAGTTAATGGGATAGAGTTGCAGTCTTGTGTGTCTAATGTCTTCCCAAATGGGTTTCCTATTAAAAAGAACATTGCTGCAAAGCTTGACAAGTGCAGGAAACTGATAAAATATGCTAAGAAATCATTGGACAATGGGACACCCTATTATGGAATTGAGGCATGTAATGAGGTTTTGAATGGCTATAGCCATATCATTGGGTCTGCGCTTAAACATGAATGCTTGTGCACTCGTGCTGCACTATTGATCAAGAGGGACTGGAAAAACGATGCTCATATGGCTATAAGAGACTGCTATGCTGCTAGAAAAATCGATAATTCCTCCTATAAAGCACTGTTCTACATGTCAGAAGCACTGTCACAGTTGGGTAGACATGAAGATGCTTTGGATTTTGCTGAAGCTTCCCAGTCACTGGCCCCACACAAATCTGAAGTTGCAGAGAGAGTGGAGAATGTGAAGAAGGATATTGCTTTAGCTGAAGCTGAAAAAAATAACAAGGCCAATGATGGTGCATCAAGGTCTGACATTCGAGGTGGAAGAATATTATCGTTAAGTGACATACTCTATCGCCCGGAGGCTAACGGTGATGTTCCACAAGATGGTCCTAGATCAGACAGGGATGATTCTGATTACGATGAGGAATTGGAGTTGGACTTTGAAACATCAATGTCTGGTGACGAGGCACAAGACCTTGATTCAAATATTCTTCATGGAAGTTTAAATGTTAGAATTCACCGGAGAGGTGACTCTAGAGACAATGCAGGTGCTAGTGCCCCAAGCGATTCACCTTCATCTTCGTCACAAAGCAGTAGAGCATGTTATTTGCCTGAACCAGCTGTTGATATGAAACAGAGATTTATTGGCCATTGCAATATTGGGACGGACATAAAACAGGCCAATTTTCTTGGTCAAAGAGGAGAATATGTTGCCAGTGGAAGTGATGATGGCAGATGGTTTATTTGGGAAAAGCGTACTGGTAGACTCATAAAAATTCTAAATGGTGATGGATCTGTTGTAAATTGTATACAATGCCATCCATTTGATTTTGTTGTCGCAACCAGTGGGATTGATAGCACAATAAAGATATGGACTCCAAGTGCCCCTGTTCCATCTTCTGTAGCTGGTGGTTCGGCTGGACCAGAAACTGGCGATGTGTTGTCTGCTATGGAAAGCAATCAACAAAAGTTATCCCGTAGCCGTAATTCTATATTACCCTTTGAGCTTTTGGAACCATTTAGAATGCACGACTTTCCTGAGGGTTCGTTACGCTTGCGTCCATTTGAATGTGCTCAAAGCTAA 1866 0.4207 MPCSKSQEIGCKVENGNPNVVWSASEDGTLRQHDFREGTSCPPAGSSHQECRNILLDLRSGSKRSLADPPKQVLSLKSCDISSTRPHLLLVGGSDAFARLYDRRMLPPLSSCRKRMSPPPCVNYFCPMHLSDRGHPSLHLTHVTFSPDGHEVLLSYSGEHAYLMNVNHAGVNEMQYTSGDVSKMMTYSPIVNGIELQSCVSNVFPNGFPIKKNIAAKLDKCRKLIKYAKKSLDNGTPYYGIEACNEVLNGYSHIIGSALKHECLCTRAALLIKRDWKNDAHMAIRDCYAARKIDNSSYKALFYMSEALSQLGRHEDALDFAEASQSLAPHKSEVAERVENVKKDIALAEAEKNNKANDGASRSDIRGGRILSLSDILYRPEANGDVPQDGPRSDRDDSDYDEELELDFETSMSGDEAQDLDSNILHGSLNVRIHRRGDSRDNAGASAPSDSPSSSSQSSRACYLPEPAVDMKQRFIGHCNIGTDIKQANFLGQRGEYVASGSDDGRWFIWEKRTGRLIKILNGDGSVVNCIQCHPFDFVVATSGIDSTIKIWTPSAPVPSSVAGGSAGPETGDVLSAMESNQQKLSRSRNSILPFELLEPFRMHDFPEGSLRLRPFECAQS 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02685 621 PANTHER WD REPEAT DOMAIN-CONTAINING FAMILY 11 592 IPR045151 -
Viun9g02685 621 MobiDBLite consensus disorder prediction 438 461 - -
Viun9g02685 621 FunFam Transducin family protein / WD-40 repeat family protein 422 596 - -
Viun9g02685 621 Gene3D - 470 607 IPR015943 GO:0005515
Viun9g02685 621 MobiDBLite consensus disorder prediction 444 461 - -
Viun9g02685 621 Pfam WD domain, G-beta repeat 516 552 IPR001680 GO:0005515
Viun9g02685 621 MobiDBLite consensus disorder prediction 380 399 - -
Viun9g02685 621 Gene3D Tetratricopeptide repeat domain 211 345 IPR011990 GO:0005515
Viun9g02685 621 SMART WD40_4 69 102 IPR001680 GO:0005515
Viun9g02685 621 SMART WD40_4 514 553 IPR001680 GO:0005515
Viun9g02685 621 SMART WD40_4 468 511 IPR001680 GO:0005515
Viun9g02685 621 SUPERFAMILY WD40 repeat-like 16 555 IPR036322 GO:0005515
Viun9g02685 621 Coils Coil 331 358 - -
Viun9g02685 621 ProSiteProfiles Trp-Asp (WD) repeats profile. 521 552 IPR001680 GO:0005515
Viun9g02685 621 SUPERFAMILY TPR-like 257 334 IPR011990 GO:0005515
Viun9g02685 621 Gene3D - 5 185 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02685 Viun-Chr9 35710390 35721430 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02685 K11807 - gmx:100793917 1090.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g02685 9 35710390 35721430 Viun9g02685 9 35710390 35721430 ECH