Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02662 ATGGTTTTCACAGCTTCTCCATCTCCGCTTATGCAGTCGAACTCAAGTTTCGCACCTTCTTCCTCCTCTCGCTTCTCCTTCTCCACAACTCCCTCCTACTGTGCATTTCCTCCACGCAGAATCGCCACGCCAAGAACGGGACCGTCTCCGGCCCAAGCCCAAGCCCAGGCCCAGGCCAAGGAGGCCAAGCTCTGGGGCGGGAGGTTCAAGGAGGGCGTAACCGACGCCGTGGAGAGGTTCACGGAGTCGATCTCCTTCGACAAACAGCTCTACAAGCAAGACATAAAGGGAAGCAGAGCGCATGCGTCAATGCTCGCTCACCAGGGTTTGATAAGCGAGAGCGACAGAGACTCCATTCTCGAAGGTTTGGAGAAAATAGAGCGGCGCATTGAAAATGGAGAGTTCAGTTGGAGAGCTGATAGAGAGGACGTGCATATGAACATCGAGGCTGCGCTCACCGACATGATCGGTGAGCCTGCGAAGAAGCTCCACACCGCTCGGAGTAGGAACGATCAGGTTCAGACTGACTTTCGCCTCTGGTGCCGCGACGCCATCGACGGGATCCTCGTGAGTATGAAGCAGCTTCAGGTGTCGCTGCTGACCCTGGCTTTGAGGAACGAGGGTCTCATTGTTCCTGGTTACACTCACTTGCAGCGCGCGCAGCCCGTTTTGCTGCAGCATCTTCTCTTGGCTTATGTTGAGGAGATTGAGCGTGACGCTGGGCGCTTGGTAGATTGTAGAGCTAGGATGAATTTCTGCCCCTTAGGGGCTTGTGCCTTGGCTGGTACAGGACTTCCCATAGATCGATTCATGACTTCAGAAGCTTTAGGATTTACGGCTCCCTTGAGGAATAGTATAGATGCAGTTTCGGACCGAGATTTTGTACTGGAGTTTCTCTCTGCAAATGCCATCACAGCTGTGCATCTTTCTCGGCTTGGTGAGGAGTGGGTGCTGTGGGCTTCAGAGGAATTTGGATTTATCACACCAAGCGACTCTGTTTCAACTGGAAGTAGTATTATGCCTCAGAAAAAGAATCCAGATCCCATGGAACTTGTTCGTGGGAAATCTGCCAGAGTCATAGGGGACCTGGTTACTCTTCTCACATTGTGCAAAGGTCTTCCTCACGCTTACAACCGTGACTTGCAGGAAGACAAAGAACCAGTATTTGACAGCGTGAAAACTATTTTGGGGATGCTTGAGGTATCAGCAGAATTTGCTCTCAATATTTCCTTCAATCTCGAAAGAATACAAAAGGCATTACCTGCTGGTCATCTTGATGCAACCACACTAGCTGATTATCTTGTTAATAAGGGTGTGCCATTTAGAACGTCTCATGATATCGCTGGAAAATCTGTTGCTTTATGTACACTTAAGAACTGCCAACTGTTGGACTTAAGTCTTGATGAGCTCAGAAGTATAAATCCAGTTTTTGAAGAGGATGTGTATGATTTTCTTGGAGTAGAAAATGCGATCCAGAAATTTGTCTCTTACGGCTCCACCGGGTCAGCATGTGTTGCCAGCCAAATTGAGTATTGGATGAAAAAACTTGAAATGGAGTGA 1560 0.4923 MVFTASPSPLMQSNSSFAPSSSSRFSFSTTPSYCAFPPRRIATPRTGPSPAQAQAQAQAKEAKLWGGRFKEGVTDAVERFTESISFDKQLYKQDIKGSRAHASMLAHQGLISESDRDSILEGLEKIERRIENGEFSWRADREDVHMNIEAALTDMIGEPAKKLHTARSRNDQVQTDFRLWCRDAIDGILVSMKQLQVSLLTLALRNEGLIVPGYTHLQRAQPVLLQHLLLAYVEEIERDAGRLVDCRARMNFCPLGACALAGTGLPIDRFMTSEALGFTAPLRNSIDAVSDRDFVLEFLSANAITAVHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPHAYNRDLQEDKEPVFDSVKTILGMLEVSAEFALNISFNLERIQKALPAGHLDATTLADYLVNKGVPFRTSHDIAGKSVALCTLKNCQLLDLSLDELRSINPVFEEDVYDFLGVENAIQKFVSYGSTGSACVASQIEYWMKKLEME 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02662 519 CDD Argininosuccinate_lyase 83 516 IPR009049 GO:0004056|GO:0042450
Viun9g02662 519 Gene3D - 83 290 IPR024083 -
Viun9g02662 519 Gene3D Fumarase/aspartase (Central domain) 180 509 - -
Viun9g02662 519 Gene3D - 421 493 - -
Viun9g02662 519 FunFam Argininosuccinate lyase chloroplastic 290 447 - -
Viun9g02662 519 Pfam Lyase 67 361 IPR022761 -
Viun9g02662 519 PRINTS Argininosuccinate lyase family signature 292 316 - -
Viun9g02662 519 PRINTS Argininosuccinate lyase family signature 371 390 - -
Viun9g02662 519 PRINTS Argininosuccinate lyase family signature 336 352 - -
Viun9g02662 519 PRINTS Argininosuccinate lyase family signature 203 223 - -
Viun9g02662 519 PRINTS Argininosuccinate lyase family signature 162 184 - -
Viun9g02662 519 PRINTS Argininosuccinate lyase family signature 254 270 - -
Viun9g02662 519 Hamap Argininosuccinate lyase [argH]. 63 514 IPR009049 GO:0004056|GO:0042450
Viun9g02662 519 SUPERFAMILY L-aspartase-like 67 516 IPR008948 GO:0003824
Viun9g02662 519 FunFam Argininosuccinate lyase 62 167 - -
Viun9g02662 519 Pfam Argininosuccinate lyase C-terminal 426 491 IPR029419 -
Viun9g02662 519 FunFam Argininosuccinate lyase 422 493 - -
Viun9g02662 519 PANTHER ARGININOSUCCINATE LYASE 27 518 IPR009049 GO:0004056|GO:0042450
Viun9g02662 519 NCBIfam argininosuccinate lyase 64 514 IPR009049 GO:0004056|GO:0042450
Viun9g02662 519 ProSitePatterns Fumarate lyases signature. 336 345 IPR020557 GO:0003824
Viun9g02662 519 MobiDBLite consensus disorder prediction 1 25 - -
Viun9g02662 519 PRINTS Fumarate lyase superfamily signature 336 352 IPR000362 -
Viun9g02662 519 PRINTS Fumarate lyase superfamily signature 208 226 IPR000362 -
Viun9g02662 519 PRINTS Fumarate lyase superfamily signature 292 319 IPR000362 -
Viun9g02662 519 PRINTS Fumarate lyase superfamily signature 163 181 IPR000362 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02662 K01755 - gmx:100780483 900.968
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g02662 9 35554463 35557425 Viun9g02662 9 35554463 35557425 ECH