Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02657 ATGCTCACTAACGACGATTTCCAAGGCGTTTCAAATTGCTATGTGTTTAAGAGTCGATTGCAGGAGTATGCGCAGAAGGCGGGGCTACCTACTCCTGTCTATGAAACTATCAAGGAAGGACCTTCCCATGAACCTTCTTTCAGGTCAACAGTGATAGTGAATGATGTCCGGTATGGTTCTTTGCCTGGATTTTCCAATCGGAAGGCAGCAGAGCAGTCCGCTGCCGAAGTTGCTTTGGTTGAGTTGGCCAAATCTAATGCTGTTAATCAATCCATCACTCAACCTGTTCATGAAACAGGATTATGCAAAAATTTACTTCAGGAATATGCCCAGAAAATGAACTATGCAATGCCTATGTATCAGTGCAAAAAGGATGAAACACCTGGTCGAGCATCAGTATTTTCATGTACGGTGGACATTGGAGGTATACTCTATATTGGGGGAGCAGCAAAAACCAAGAAGGAAGCAGAGATTAAAGCTGCCAGAACTGCTTTATTAGCTATCCAGACAAGTGCATCGCATGCTTCCCAAAACCAGGCTGGCCATCCACAGTTGACAGTCCTTCCATGCAGAAAAAGGGTAGCAGAATCTGTTTTGATAGCCGACGAGAATTCGAATCCCCCAAAGCCTAAGAAAGCACGATTTAAAAGGAAATCTTCTAAGAGGAAAACTCCTAGAGATAAGATAGGCCTAATTCATACTGAAAACGTGGGTATTGAAGCAAATATTGATCATGAAGTAGAAACACAAGCAAGTGTTAATGGTGAATCAGGTGTGCAAGAAACGAAATCTGAAAAATTCACTTCAGAAGTCATGAAGAATTTAGAGAATGGAATATCATTTAAGTATCCCGAGAAAGAAGCATATGCTGTGGAGGGTTCTCTTGTTTTTGAAAATGGAAAGTCAGCAGAATTATACTCCAAAAGTCTTGGGACTGTTGTTACAGATCTCTCTTCCGTGTCAAATGGAGACATATTGGAAACAAGTGTGGAGAGGAACAAACAGTTATACAACGGAGAAATGGTTTCTGACCATTGTGTTGTGGGGGGTTGA 1053 0.4179 MLTNDDFQGVSNCYVFKSRLQEYAQKAGLPTPVYETIKEGPSHEPSFRSTVIVNDVRYGSLPGFSNRKAAEQSAAEVALVELAKSNAVNQSITQPVHETGLCKNLLQEYAQKMNYAMPMYQCKKDETPGRASVFSCTVDIGGILYIGGAAKTKKEAEIKAARTALLAIQTSASHASQNQAGHPQLTVLPCRKRVAESVLIADENSNPPKPKKARFKRKSSKRKTPRDKIGLIHTENVGIEANIDHEVETQASVNGESGVQETKSEKFTSEVMKNLENGISFKYPEKEAYAVEGSLVFENGKSAELYSKSLGTVVTDLSSVSNGDILETSVERNKQLYNGEMVSDHCVVGG 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02657 350 SUPERFAMILY dsRNA-binding domain-like 103 169 - -
Viun9g02657 350 FunFam Double-stranded RNA-binding protein 1 95 170 - -
Viun9g02657 350 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 101 170 IPR014720 -
Viun9g02657 350 MobiDBLite consensus disorder prediction 200 228 - -
Viun9g02657 350 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 15 84 IPR014720 -
Viun9g02657 350 PANTHER RIBONUCLEASE III 13 228 IPR011907 GO:0003723|GO:0004525|GO:0006364
Viun9g02657 350 CDD DSRM_AtDRB-like_rpt1 15 83 IPR044450 GO:0003725
Viun9g02657 350 SMART DRBM_3 102 169 IPR014720 -
Viun9g02657 350 SMART DRBM_3 16 83 IPR014720 -
Viun9g02657 350 Gene3D - 16 97 - -
Viun9g02657 350 Gene3D - 98 170 - -
Viun9g02657 350 FunFam double-stranded RNA-binding protein 1 13 89 - -
Viun9g02657 350 Pfam Double-stranded RNA binding motif 103 166 IPR014720 -
Viun9g02657 350 Pfam Double-stranded RNA binding motif 17 79 IPR014720 -
Viun9g02657 350 SUPERFAMILY dsRNA-binding domain-like 15 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02657 Viun-Chr9 35501160 35505402 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02657 - - gmx:100782651 555.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g02657 9 35501160 35505402 Viun9g02657 9 35501160 35505402 ECH