LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Viun9g02655	ATGGAGCCCGATGAGAAAAAAGCAATGATTCGCGATATCGCGCTACAAGTCATCGTCATCTCCATAGCCATCGTCTCCTTCCTCTGGATGCACGGCATTCCCCAGCGCCTCTATGCCAAGCTCCGCCACCGTCCCCCAAATCCACGCGCCGTCCAAGCGAAGAGCCATTTCGTCAAAGGCGCGCAACTCGTCGCGCAAGCCAGAAGATCGAAAAGCGCCTCCGTCACAGTCTCACTCGCTAAACAGGCTCTAGAGGAAGCCGAGAAGGCGATCGCGCTAGATCCTAAGGACGCCGCCTCGCACTTCTTGAAGTCCATGGCGCTCGATCTCCAGGGCTTCCGTAGCAACGCGCTGGACGCGCTAGACGCCGCGCTGTCTCCGCTGGCCGCGGCGTCGCTGGCGGCCGACGAGAGAGGCGACGCGCTGCTGAAGAGAGCGGAGCTGAAGATCTCGTTGAGCGAGCGGCGCGTTGACTCGGTTCTGGCGGATTTGAACGAGTCGGTGAAGCTGAGTCCGCGGAACCCGAAAGCGTGGTGCATGCTGGGAGAGTGTTATGAGGAAAATGAGATGGGAGAGGAAGCGAAGAAGGCTTATAAAGAGGCTCTCCAATTGGAGCCACAATTGAACGTGGCTCAGGAAGCTCTCAACAGGTTGGGTTCGTCGTAG	666	0.5871	MEPDEKKAMIRDIALQVIVISIAIVSFLWMHGIPQRLYAKLRHRPPNPRAVQAKSHFVKGAQLVAQARRSKSASVTVSLAKQALEEAEKAIALDPKDAASHFLKSMALDLQGFRSNALDALDAALSPLAAASLAADERGDALLKRAELKISLSERRVDSVLADLNESVKLSPRNPKAWCMLGECYEENEMGEEAKKAYKEALQLEPQLNVAQEALNRLGSS	221

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Viun9g02655	221	Gene3D	Tetratricopeptide repeat domain	41	132	IPR011990	GO:0005515
	Viun9g02655	221	ProSiteProfiles	TPR repeat profile.	175	208	IPR019734	GO:0005515
	Viun9g02655	221	SMART	tpr_5	175	208	IPR019734	GO:0005515
	Viun9g02655	221	Gene3D	Tetratricopeptide repeat domain	133	220	IPR011990	GO:0005515
	Viun9g02655	221	Pfam	Tetratricopeptide repeat	175	207	IPR001440	GO:0005515
	Viun9g02655	221	PANTHER	TETRATRICOPEPTIDE REPEAT PROTEIN 6	80	212	-	-
	Viun9g02655	221	SUPERFAMILY	TPR-like	81	214	IPR011990	GO:0005515

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Viun9g02655	Viun-Chr9	35485121	35486295	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Viun9g02655	-		-	vum:124835704	365.155

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Viun9g02655	9	35485121	35486295	Viun9g02655	9	35485121	35486295	ECH