Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02619 ATGCATTATCCATCAAGATTTAATATATTAGCAATCTATTTTGGATATTTAGATTTTGCAACCGAATCCAACATTAGAAAGTGTTCAACGAAGATTCAAGTAAGTAAAATCAAACACATCACAGTGAAGTTACGGATGAGAGTGAACATTTCTTTGACGAAGCAAAAGTGTATGGAAAATATTCGCAACGAAGAACACATTCCTCTAATAAACTCAACATCGCAAAACGAATCTAACACTCACACTCGCTCTCTCTTCCACCGATCATGTTCCGAATCCGGCAACCTATGGAAAATCGCCGCCCCTTCAATCTTCACCCGCCTAGCCATGTTCTCCATCACCGTTGTCACCCAGTCCTTCGCCGGCCACCTCGCCGACCTCGATCTCGCCGCCATTTCCCTCGCCTGCACCGTCCTCATCTCCATCACCTTCGGCTTCATGTTGGGTATGGCGAGTGCGCTTGAGACGCTATGCGGCCAGGCCTACGGCGCCGGACAGCACCGCATGTTGGGCGTTTATCTGCAACGCTCGTGGGTTGTTCTGTCCCTGTCCTCGATTCTCATGCTGCCAGTGTTCGTGTTCGCGACGCCGCTGTTGAAGTTGGTGGGGCAGCCCGTCGCGGTGGCGGAGCGGGCGGGGCTGGTGGCGGTCTGGTTGATCCCGTTCCACCTCAGTTTCCCGTTTCAGTTCACATTGCAGCGGTTCCTGCAGTGCCAGTTAAAGACCGGTATCGCTGCTTGGGTTTCAGGGGCGGCTCTTGCGATTCATGTTGTAGTGAGTTGGGTTTTTGTTTATCGGATGAGAATTGGGATCGTTGGCACTGCACTTTCCATTGGTTTCTCGTGGTGGCTCTCGGTTTTGGGAATGCTCGGGTATACACTCTTTGGTGGGTGCCCGTGTTCGTGGACTGGTTTTTCTGCTGAAGCTTTTGTTGGTCTCTGGGAATTCCTTAAACTCTCTTTGGCTTCTGGGGTCATGCTTGCGTTAGAGAATTTCTATTACAGACTGTTGCTTATAGTCTCTGGATATATGCACAACACTGAGATTGCAATTGATGCTCTTTCAGTTTGTGTGACGATATATGGCTGGGAATCCATGATACCGCTTGCATTTTTGGGTGCAACCGGGGTTCGTGTAGCAAACGAGCTTGGCGCAGGCAATGCAGAAGGTGCAAAATTTGCAACTGTGGTTTCTGTGGTAAATACTGTACTGGTGGGATTTATATTTTGGTTGGTAATTGTATTCTTCAACAAGAATCTTGCCTTGATCTTTACATCGAGCTCGTTAGTTATCCAAATGGTCAATGATCTGGCAACGTTGTTAGCTTTTACTGTTCTTCTTAACTGCATTCAACCAGTTCTTTCAGGGGTGGCAGTAGGATCTGGTCGTCAAGCAGCAGTGGCATATATAAACATTGGCGGTTACTACTTGGTTGGAATACCTCTTGGGGTTCTCCTTGGCTGGTTGCGTCCTTCGAGTATTGTTGGAATGTGGAGTGGAATGATGAGTGGAACGGTGGTTCAAACATTGATCTTGGCTACTATTACGATGAGATATGATTGGGAAAAAGAGGTTCGGAAAGCTCAAATTCATATCAAAGAGGAAGCACATTCTAACTAA 1620 0.4741 MHYPSRFNILAIYFGYLDFATESNIRKCSTKIQVSKIKHITVKLRMRVNISLTKQKCMENIRNEEHIPLINSTSQNESNTHTRSLFHRSCSESGNLWKIAAPSIFTRLAMFSITVVTQSFAGHLADLDLAAISLACTVLISITFGFMLGMASALETLCGQAYGAGQHRMLGVYLQRSWVVLSLSSILMLPVFVFATPLLKLVGQPVAVAERAGLVAVWLIPFHLSFPFQFTLQRFLQCQLKTGIAAWVSGAALAIHVVVSWVFVYRMRIGIVGTALSIGFSWWLSVLGMLGYTLFGGCPCSWTGFSAEAFVGLWEFLKLSLASGVMLALENFYYRLLLIVSGYMHNTEIAIDALSVCVTIYGWESMIPLAFLGATGVRVANELGAGNAEGAKFATVVSVVNTVLVGFIFWLVIVFFNKNLALIFTSSSLVIQMVNDLATLLAFTVLLNCIQPVLSGVAVGSGRQAAVAYINIGGYYLVGIPLGVLLGWLRPSSIVGMWSGMMSGTVVQTLILATITMRYDWEKEVRKAQIHIKEEAHSN 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02619 539 PANTHER MULTIDRUG RESISTANCE PROTEIN 87 521 - -
Viun9g02619 539 CDD MATE_eukaryotic 92 527 IPR045069 GO:0042910|GO:1990961
Viun9g02619 539 Pfam MatE 102 262 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Viun9g02619 539 Pfam MatE 324 484 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Viun9g02619 539 NCBIfam MATE family efflux transporter 102 498 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02619 Viun-Chr9 35214655 35219340 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02619 K03327 - gmx:100814869 793.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g02619 9 35214655 35219340 Viun9g02619 9 35214655 35219340 ECH