Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02616 ATGGCGCAGCAAAAGCGGTTCAAAAATCTGACCCAAAACCTCAAAGACAAAGCCTCCGTCATCGCGGCGGTGCTATCCCCAAAGCGCCACGTGTCCTCCGTCCGGGTGCACGTTCTCCGCGCCACCACACACGCCCTCACGGCGCCTCCCTCCGAAGAAACCATCGCCGCGGTACTCACGGTGGGGCAGGGCTCCAACCGCCACCCGCGCGACTGCATCGACGCGCTCATGGACCGCCTGCACCAGACGCGCAGCGCCACCGTGGCGCTCAAGTGCCTCTTCACTCTACACAACGTCGTCGTAAAGGGATCCTTCACGTTGAAGGACCAACTCTCGTGCTACCCTTCGTACGGCGGCCACAACTTTCTTAACCTCTCGAACTTTCGCGACGAGTCGGACGTGGAATCGGTGGAGCTGAGTTCTTGGGTGCGGTGGTACGCCGGCGTGCTGGAACAGAGCCTCACGGTTTCCAGAGTCTTGGGGTATTACCTCAACGCCTCTCGCGAGTCCCAAGAAAGTAAAAAGATTATCCTTTCGAACGCGTCGAATGCGGATTTGTTGTACAAGGTGGAGGCGCTCGTGGGTTTCGTCGAACAGATAAGCCACGTGCCTGATTCGCTTCACCTGCAGAGGAACGAGTTGGTGTACGAGGTTGTACGGCTGGTGGGCGAGGATTATAGGAGCGTGCAGGTTGAGATTTTGTTGCGCGTGGAAGAACTCCGGGAGAGAATGGAGGATCTTGATGTGGGTGAGTTGAACGAGTTGGTTGGGTATTTAGGGAGATTGGAGGAGACTCAGGAGAAGTTGGTTCTTTTGTTCGTGAATAGGAAAAGGAACAATGGATTCTGGGATTTGCTTCACAACACTAAGATCAAGGGAATCACGAAGAAGAGGGAGATTGAAGGGAAGTGGCTCACGGTGGTTGTCAACACCGGCGCCGCCGAATTGGCTCGCTCCACAAACCCGTTTCTTGACCCGGGGCAACTGAGTCCGGTCCCACGGGTAGATTTTGCAACGGTAAGGTGA 1026 0.5604 MAQQKRFKNLTQNLKDKASVIAAVLSPKRHVSSVRVHVLRATTHALTAPPSEETIAAVLTVGQGSNRHPRDCIDALMDRLHQTRSATVALKCLFTLHNVVVKGSFTLKDQLSCYPSYGGHNFLNLSNFRDESDVESVELSSWVRWYAGVLEQSLTVSRVLGYYLNASRESQESKKIILSNASNADLLYKVEALVGFVEQISHVPDSLHLQRNELVYEVVRLVGEDYRSVQVEILLRVEELRERMEDLDVGELNELVGYLGRLEETQEKLVLLFVNRKRNNGFWDLLHNTKIKGITKKREIEGKWLTVVVNTGAAELARSTNPFLDPGQLSPVPRVDFATVR 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02616 341 SUPERFAMILY ENTH/VHS domain 34 161 IPR008942 -
Viun9g02616 341 PANTHER CLATHRIN ASSEMBLY PROTEIN 8 273 IPR045192 GO:0048268|GO:0072583
Viun9g02616 341 Gene3D - 4 163 IPR008942 -
Viun9g02616 341 FunFam Putative clathrin assembly protein At4g40080 6 163 - -
Viun9g02616 341 Pfam ANTH domain 35 259 IPR011417 GO:0005543
Viun9g02616 341 ProSiteProfiles ENTH domain profile. 26 164 IPR013809 -
Viun9g02616 341 SMART enth_2 32 164 IPR013809 -
Viun9g02616 341 CDD ANTH_N_AP180_plant 35 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02616 Viun-Chr9 35200315 35201698 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02616 - - gmx:100788852 520.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g02616 9 35200315 35201698 Viun9g02616 9 35200315 35201698 ECH