Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02606 ATGCCCCTCCAGCCATTACTCTGCGGTTCAAAAGTCGCATCTCAATCCACACTTTTCGCTTCGGCGTTTTCCGCCAGAAACAACGCCGGCCGCTGTTCGTTCACCGGAAATTCGTCAGTCCGTGGCGTGAGGCCGGTGAGGTTTATGAAGCAAGCATCGGGAAGCATAACGAGCGATGAACATGGAGTTTTTAGCGAGACAATGGATCGTTCCAAACACAGGACACCTAATGCTTATGGCGGTCGTGCTCAAGAAGGGGTTCTTGAGGAAGAATCCTCCAAAGTGATAGAGAGCAGACCATCATGGAAAACTTTCCCAGGCAAGGCATTTCCATTGGGTGTATCAGAAGTTGACAGTGGCATCAATTTTTCTATTTTTTCTCGACATGCAACTGCTGTCACTCTTTGTTTGGTCCTTCCTGAGAGGGGAAGTATAGACACATTGAGTGGTGGCATGATAGAAATGGTATTGGATCCTGGTTTGAACAGAACTGGGGACATTTGGCACATTTATATTGAGGATCTTCCTCGAAGCAATGTTCTATACGGATATCGCATAGATGGACCTCAAGACTGGGGTGAGGGGCATCGATTTGACAGCAGTGTTGTGCTTGTTGATCCTTATGCAAAACTAGTTGAAGGCCGAAGGTATTTTGGGGATATTAGCATGAAGTTGTCTAAGTTTCTTGGCACATATGATTTTGACAGCTTGCCTTTTGATTGGGGAGAAAATTACAAGCCTCCAAATATTTCTGAGAAGGATCTTGTTATATATGAGATGAATGTCCGTGCATTTACAAATGATGAATCTAGTGGTTTGGATAGCAGCATTCGTGGTAGCTATCTCGGTGTGATTGAAAAGATTCCACACCTTCTAGAGCTTGGTATCAATGCAGTAGAATTGCTGCCCGTCTTTGAGTTTGATGAGTTCGAATTCCAGAGGCGTCCAAATCCCAGAGATCACATGATTAATACGTGGGGTTATTCTACAATAAATTTCTTTTCTCCTATGAGTCGCTATGGTAGTGCTGGTGGAGGATCAGTTAATGCTTCTCGAGAGTTCAAAGAAATGGTTAAAGCCTTACATTCTTCTGGTATAGAGGTTATTTTGGATGTGGTCTACAATCATACTAATGAGGCTGATGATGCCAATCCTTACACTACCTCATTTCGTGGCATAGATAATAAGGTTTATTACATGCTGGACAATAATGGGCGATTGCTGAACTTCTCTGGCTGTGGAAATACATTAAATTGTAACCATGCTGTAGTTATGGAGCTAATTCTTGACAGCCTAAGACACTGGGTCACCGAATATCACGTGGATGGATTTCGATTTGATCTTGCAAGTGTCCTTTGTCGAGGAATTGATGGCTCCCCCCTTAATGCCCCCCCGATTATTAGGGCAATTGCTAAAGATGCAGTCTTATCAAGATGTAAAATTATTGCAGAGCCTTGGGATTGTGGAGGTCTTTATCTTGTTGGGAGTTTTCCAAATTGGGATCGGTGGGCTGAATGGAATGGGAAATATCGTGATGATGTACGGAAATTTATTAAGGGTGATTATGGTGTAAAGGGGAGCTTTGCTACTCGTGTTGCTGGGTCTTCTGATCTTTATAGAGTGAACAGGCGAAGGCCATATCATAGTATTAACTTTGTTATTGCACACGATGGATTCACCTTGCGTGACCTTGTTTCATACAATTTGAAGCACAATGAAGCCAATGGGGAAGGTGGAAATGATGGTAGCAATGATAACTTTAGTTGGAATTGTGGTTTCGAAGGGGAAACTGACGATGCTAGTATAAGAGCTCTGCGATCACGGCAAATGAAAAACTTTCACTTGGCACTAATGATATCTCAGGGTACACCAATGATGCTTATGGGAGATGAATATGGTCATACTCGCAATGGAAATAACAATAGTTATGGGCATGATACTGCCATAAATAATTTTTTGTGGGATCAGTTGGATGCCCGGAAGAGTGATCACTTCAGGTTTTTCTCGAAGGTGATAAAGTACAGGCATGCACATGAAGTATTCAGCCATGAAAGTTTTCTCAGCAAGAATGACATAACATGGCATGAAGACAATTGGGATAATCATGACAGCAAATTTCTAGCATTCACGCTTCATGCCAGGAGCGGGGCAGATATCTATTTGGCATTTAATGCTCATGATTACTTTATCAAAGCTCTGCTGCCCACACCTCCACAAACGAGGAAGTGGGTCCGTGTGGTGGACACTAATCTGAAATCACCGGACGACTTTGTTCTTGATGGTGTCCACAGCATAGAAAACACGTATAATATAGCTCCATACTCCTCCATTCTTCTTGAGGCCAAGTTTGACTTTGTATTAAAAGGATAA 2370 0.427 MPLQPLLCGSKVASQSTLFASAFSARNNAGRCSFTGNSSVRGVRPVRFMKQASGSITSDEHGVFSETMDRSKHRTPNAYGGRAQEGVLEEESSKVIESRPSWKTFPGKAFPLGVSEVDSGINFSIFSRHATAVTLCLVLPERGSIDTLSGGMIEMVLDPGLNRTGDIWHIYIEDLPRSNVLYGYRIDGPQDWGEGHRFDSSVVLVDPYAKLVEGRRYFGDISMKLSKFLGTYDFDSLPFDWGENYKPPNISEKDLVIYEMNVRAFTNDESSGLDSSIRGSYLGVIEKIPHLLELGINAVELLPVFEFDEFEFQRRPNPRDHMINTWGYSTINFFSPMSRYGSAGGGSVNASREFKEMVKALHSSGIEVILDVVYNHTNEADDANPYTTSFRGIDNKVYYMLDNNGRLLNFSGCGNTLNCNHAVVMELILDSLRHWVTEYHVDGFRFDLASVLCRGIDGSPLNAPPIIRAIAKDAVLSRCKIIAEPWDCGGLYLVGSFPNWDRWAEWNGKYRDDVRKFIKGDYGVKGSFATRVAGSSDLYRVNRRRPYHSINFVIAHDGFTLRDLVSYNLKHNEANGEGGNDGSNDNFSWNCGFEGETDDASIRALRSRQMKNFHLALMISQGTPMMLMGDEYGHTRNGNNNSYGHDTAINNFLWDQLDARKSDHFRFFSKVIKYRHAHEVFSHESFLSKNDITWHEDNWDNHDSKFLAFTLHARSGADIYLAFNAHDYFIKALLPTPPQTRKWVRVVDTNLKSPDDFVLDGVHSIENTYNIAPYSSILLEAKFDFVLKG 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02606 789 Gene3D Glycosidases 235 689 - -
Viun9g02606 789 CDD E_set_GDE_Isoamylase_N 110 259 IPR044505 -
Viun9g02606 789 SMART aamy 259 666 IPR006047 GO:0005975
Viun9g02606 789 Gene3D - 690 786 IPR013780 -
Viun9g02606 789 PANTHER GLYCOGEN DEBRANCHING ENZYME 87 782 - -
Viun9g02606 789 FunFam Glycogen debranching enzyme 235 689 - -
Viun9g02606 789 Pfam Alpha amylase, catalytic domain 280 397 IPR006047 GO:0005975
Viun9g02606 789 Pfam Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 111 209 IPR004193 GO:0004553|GO:0005975
Viun9g02606 789 SUPERFAMILY Glycosyl hydrolase domain 689 782 - -
Viun9g02606 789 Gene3D Immunoglobulins 92 229 IPR013783 -
Viun9g02606 789 SUPERFAMILY (Trans)glycosidases 238 682 IPR017853 -
Viun9g02606 789 SUPERFAMILY E set domains 106 243 IPR014756 -
Viun9g02606 789 CDD AmyAc_Glg_debranch 239 678 - -
Viun9g02606 789 MobiDBLite consensus disorder prediction 63 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02606 Viun-Chr9 35100811 35117393 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g02606 82 782 Glycoside Hydrolase AT4G09020 75.783 0.0 1144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02606 K01214 - gmx:100806342 1445.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g02606 9 35100811 35117393 Viun9g02606 9 35100811 35117393 ECH