Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02604 ATGGCTTTAAATTGTAATTCAGTTATTCTTGGAAATCTTCCTCTCTTTTTTTCTCAGGTTCTTGGCAGATTCAACCGTGCTCGCGCTGCTCGGTTGACACTCCCTCATCATGTGTGCCAAACTCCTTTGTTTATGCCTGTGGGCACACAAGGAACAATAAAGGGATTGACAAATAGTCAGCTTGAGGATATAGGTTGCCAAATAATACTTGGAAATACTTATCATTTGGCCCTTCGACCTACTTCTGAGCTTCTTGATGAAGTTGGTGGCCTTCATAATTTTATGAATTGGCAACGGGGTCTGCTTACAGATTCTGGTGGCTTTCAAATGGTTTCGCTGTTGCATCTCGCTGACATCACAGAAAAAGGTGTGACATTTCAGTCACCGGTTGATGGAAAGCCAATGCTTCTAACACCTGAGGAATCAATTCAAATCCAAAACAGAATTGGAGCAGACATCATTATGGCTCTTGATGATGTTGTAAAGACCACCATTACCGGTCCACGAGTTGAGGAAGCTATGTATCGAACACTTAGATGGATAGATAGATGTATAGCAGCTCACAAAAGACCTCATGATCAAAATTTATTCGGTATTGTTCAAGGTGGTTTAGATCCTATATTGAGGGATATCTGTGCTAAAGGTCTGGTGGATCGCAATTTGCCTGGCTATGCTATTGGTGGTCTTTCAGGCGGTGAAGATAAAAATTCATTTTGGCGAGTTGTTGCTCAGTGCACTGCTGCTTTGCCAGAGGATAAACCACGATATGTTATGGGAGTTGGTTATCCTCTTGATATTGTTGTTTGTAGTGCTTTGGGTGCTGATATGTATGACTGCGTGTATCCCACCCGTACAGCACGCTTTGGCACTGCTCTCATTCCTGAGGGAGTATTAAAATTAAAACACAAAGCAATGGCCGAAGACACCCGTCCAATTGATCCCACTTGCCCTTGTATGGTTTGCAAGAACTATACCAGGGCTTACATCCATTGCCTTGTGACAAAAGATGCAATGGGATCTCAACTTTTGTCGTATCATAATTTATACTACATGCTGCAGCTCAGTAGGAATCTACACTCTTCAATAGTTGAAGGAAGGTTCCCAGAGTTTGTATGTGACTTTCTACACAAAATGTTTCCCAAAGGTGATGTTCCTGAATGGGTCTGCGATGCTATGGAGGTGGCTGGAATCGACATTTCTTCCTGCTGTGCTCCATTTTCATCATGCGAAGAATATGTTTCTAAAAGCATGCCCAAAGAAGTTATTTTAGCAGGGTAA 1278 0.4225 MALNCNSVILGNLPLFFSQVLGRFNRARAARLTLPHHVCQTPLFMPVGTQGTIKGLTNSQLEDIGCQIILGNTYHLALRPTSELLDEVGGLHNFMNWQRGLLTDSGGFQMVSLLHLADITEKGVTFQSPVDGKPMLLTPEESIQIQNRIGADIIMALDDVVKTTITGPRVEEAMYRTLRWIDRCIAAHKRPHDQNLFGIVQGGLDPILRDICAKGLVDRNLPGYAIGGLSGGEDKNSFWRVVAQCTAALPEDKPRYVMGVGYPLDIVVCSALGADMYDCVYPTRTARFGTALIPEGVLKLKHKAMAEDTRPIDPTCPCMVCKNYTRAYIHCLVTKDAMGSQLLSYHNLYYMLQLSRNLHSSIVEGRFPEFVCDFLHKMFPKGDVPEWVCDAMEVAGIDISSCCAPFSSCEEYVSKSMPKEVILAG 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02604 425 NCBIfam tRNA guanosine(34) transglycosylase Tgt 23 378 IPR004803 GO:0008479|GO:0101030
Viun9g02604 425 Pfam Queuine tRNA-ribosyltransferase 26 378 IPR002616 GO:0006400|GO:0016763
Viun9g02604 425 NCBIfam tRNA-guanine transglycosylase 23 378 IPR002616 GO:0006400|GO:0016763
Viun9g02604 425 PANTHER QUEUINE TRNA-RIBOSYLTRANSFERASE CATALYTIC SUBUNIT 1 19 402 - -
Viun9g02604 425 Hamap Queuine tRNA-ribosyltransferase [tgt]. 15 377 IPR004803 GO:0008479|GO:0101030
Viun9g02604 425 Gene3D - 16 380 IPR036511 GO:0006400|GO:0016763
Viun9g02604 425 SUPERFAMILY tRNA-guanine transglycosylase 20 377 IPR036511 GO:0006400|GO:0016763
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02604 Viun-Chr9 35088964 35097446 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02604 K00777 - gmx:100819664 806.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g02604 9 35088964 35097446 Viun9g02604 9 35088964 35097446 ECH