LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Viun9g02579	ATGTCGACGCCGGAAGCGGAAGCGGAACCCTCCTCCAATCACATTGACTCTCTTCCGTTAGTTGACCTCCGCCTCATGTCTCAGCCCGAACTCTATACCCTCTCCATCTCTGCCGCCACTCACCGCCACCGCCGAGCCAGCGACAACGATTCCGTCATTCCCAAAATCGACCGTTCCAATTTCAACGAATCCGCGGGCAGCCGCAAACAGACCTACTCCAAACTACGTCTCAACAAGCGCAAACAAAATTCTGCGGTTCCCGCCTCCTCCTCTTACCACATTCCGGAGCCCGTGGACCAAGAAAACTCCCAAATTATCTCTCTGCTGCAGCAACTCTTTGGCGTCGAGCCTCTCCGCAACGCGCTGCGCCCTGACCGCGGTGATGCGGTGGACCGTCAACTGTTTCCAGTCCATGTTGAGTTCAAACAACCGCCTCCGGTGTCCGTGGCGTTTCAGAACGTTCCGATTGACGTTATTGATGCTTCTAATAGGAAGAGGAAACGCGGGCGGCCGAGGAAGAACGATAATTCGGTATCGGTTTTCGAGGAGGAGACCAAGAAGGTTAACGAAGAGGCCAGCGCAGTGGTCACGGTCAACGAGAGGGGATTTGGTATGGACGCTGATGGTTTGGATTATGATCCGTTTGGGGAGGAGTTGAAGAGAAGAACCGAAGGGTTGGAGACGGAGCCGCTGCTGTTGGAATTTTTGGAGACTCTGAATGGAGAGTGGGCGAGTCAGAGGAAGAAGAGGCGGATTGTCCAGGCCAGTGATCTTGGCGACTTGTTGCCAACCGGATGGAAGATAGTTATTACCCTTTTGAGGAGGGCAGGTCGTGCTTCTGTTGTTTGTCGCCGTTACGTAAGTCCTGGTGGGCACCAGTTTGAGTCTTTTAAAGAAGCTTCTGCGTACTTGCTTTCTGTTTCTGGTGTTCAAGATAAGGGCCATTTAAAATCTAGTTGTACTGATGATGGTGCTCAGCAATTGTCCAGTAGTATGAACATGGCATCTGAAAGTAGTGTTAGTCATGTCCCTGCCGGAGCCACGAAGACTGATGCCAATGCAAATTATTTGTCATTAGCTGGTGCATCTATTCACAGTGGTCAAGAGAATCAGCTCCCAATATCATTATCAATTGAGAGTGGAAATTTCAACAGTGATCTACCTTTGGGTTGTAAATCAGGAGATGCTAGTGATGACTTTGGAGGCTTTGACCGTCAAACGGAAGATAAAAAACTGTTGGAGGCTGATAAGAATGATGGAAGTTCAGTTCAGGGATGTTCTCACGTGAATGATATAGTTTGTAATGTAGGAAGTGAGAAGTTGGTTGGTGCTATTGAGTCTACTGAGGCTGCATGCAATCTTTATATTCCTTTAGTTTTCTCAACGCCCTTCTCCAATAATAATAGTGACAATGGTCAAATTTCAGAGGATATAAATGCTGCGACATGCATAAAAGGGGGCATTAGTAATTTTGCTAGTCAGGATAAAAATAGTGGGTGCCCTGAAACTGTTCCCTGTGGAGTTGACAACAATGGGCTTGGGCTTTCTGTGAAATTAGTAGAAGAGAACACTCAAAAAATAAGTTTTGATAGCAGCACACTGGCTCCAAATTCTGAGGTGAATATATTTGCTGCTAAAAGTTTAGAGGATAGACATCTTATTAGTTCACAGGAGGATATGGAGATTGCAGATGATAAGGTCATTAATGATGACAAACAACTAATTGTGTGTGGCACAGACCAGGCTGAATTTAAAGATGTTTTTTCTGATGTTAAACTGCAGAGTAGTTCTGAGGGTTTTTCACTTGTCACATCTCATTGTGAACTTAAACATGCATCTCTAAGTAATATGGACAGGACACAGACTTCCGAGTTGAAGGACTCTGCTGAGGAAAATATTTTTGACAGTGATCTATTTAGCTCATCTATTGATGAAAGAACATGTGTTCACAGTGGCTACATTAGTAATGTTTCTTTTAGCTCTTGCACACAAGATGCAGTTGAGTATGGTGGATTTGATTTTTCTTCTGATCTTAAATTAACTAAGGATGTTAGTGATAATCATATTCTTTCTAATGAGGATGCCGTGACAAGATGTTTACAGGAGAGAAGTTCCTTGAATGACCAAAGTAGCATGATGGACAATCTTTTGCATCGTAGTTCTCAAAGTAACTTATTTTCTCTAACAGCTAATCAGCACCCTTCTGCTTTTCATGATAATGTGAATATCTGTGATGGAACCTTTGATGCACTCAAAGGTGTTGATGCTGGATACATGGAGCCTCAATTGGGCATTGTTTCTTGCAGCAATATTGCTGTAGATGCGTATACTAGTGCAAGCATTATGCAGGGAAACTCACAAGGATGTGTGTCTGTTCCTCTTGGTGGAAGTATATTAAACTTTGAGAAGAAAAGTGATGATGGTGTTAATAAAGCAAGTAAGCCTTGCTTATCAGAAAAGGCTCAGAATGAAGTTGAAATATTCCAAACTGACTCTATGGGTCTACCCAAATTTCTTTAG	2520	0.4401	MSTPEAEAEPSSNHIDSLPLVDLRLMSQPELYTLSISAATHRHRRASDNDSVIPKIDRSNFNESAGSRKQTYSKLRLNKRKQNSAVPASSSYHIPEPVDQENSQIISLLQQLFGVEPLRNALRPDRGDAVDRQLFPVHVEFKQPPPVSVAFQNVPIDVIDASNRKRKRGRPRKNDNSVSVFEEETKKVNEEASAVVTVNERGFGMDADGLDYDPFGEELKRRTEGLETEPLLLEFLETLNGEWASQRKKRRIVQASDLGDLLPTGWKIVITLLRRAGRASVVCRRYVSPGGHQFESFKEASAYLLSVSGVQDKGHLKSSCTDDGAQQLSSSMNMASESSVSHVPAGATKTDANANYLSLAGASIHSGQENQLPISLSIESGNFNSDLPLGCKSGDASDDFGGFDRQTEDKKLLEADKNDGSSVQGCSHVNDIVCNVGSEKLVGAIESTEAACNLYIPLVFSTPFSNNNSDNGQISEDINAATCIKGGISNFASQDKNSGCPETVPCGVDNNGLGLSVKLVEENTQKISFDSSTLAPNSEVNIFAAKSLEDRHLISSQEDMEIADDKVINDDKQLIVCGTDQAEFKDVFSDVKLQSSSEGFSLVTSHCELKHASLSNMDRTQTSELKDSAEENIFDSDLFSSSIDERTCVHSGYISNVSFSSCTQDAVEYGGFDFSSDLKLTKDVSDNHILSNEDAVTRCLQERSSLNDQSSMMDNLLHRSSQSNLFSLTANQHPSAFHDNVNICDGTFDALKGVDAGYMEPQLGIVSCSNIAVDAYTSASIMQGNSQGCVSVPLGGSILNFEKKSDDGVNKASKPCLSEKAQNEVEIFQTDSMGLPKFL	839

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Viun9g02579	839	MobiDBLite	consensus disorder prediction	53	71	-	-
	Viun9g02579	839	MobiDBLite	consensus disorder prediction	42	71	-	-
	Viun9g02579	839	PANTHER	METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 8	6	371	IPR037472	-
	Viun9g02579	839	SUPERFAMILY	DNA-binding domain	258	306	IPR016177	GO:0003677

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Viun9g02579	Viun-Chr9	34911683	34923029	Tandem

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Viun9g02579	-		-	gmx:100780637	1165.6

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Viun9g02579	9	34911683	34923029	Viun9g02579	9	34911683	34923029	ECH