Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02545 ATGGCTGCTGAAGTATATTACCAGGCTGTTGGCACTTTGCAGTCCCATTCTCATCTGAACAATTTTAATCGTCACCAGAAGCACCAAAACAACACAGTAAGATTGGTGGCTAGGGATTTTATCAGTGGTAATGGCTTGTCAAGGAGAAGTACTAACCGCTCTGGTCGGAGGAATTGTACTGTAATTCGATCTCTAGCTTCGCAAACATCAGTGGTTGATCCGGTGTTATCTCCTTCAAGAAGCAACGCTGGTGACAGTAACAAGAAATCAAATGAAGCAGCTTTAATCCTTATTCGGCATGGTGAGTCATTATGGAATGAAAAGAACTTATTCACAGGGTGTGTTGATGTCCCTCTAAGCAAGAAGGGTATAGATGAAGCAATTGAAGCTGGAAAAAGAATTAGCAGCATTCCTGTTGATGTCATATTTACATCGGCTTTGATTCGTGCACAAATGACAGCCATGCTTGCTATGACCCAGCACCGTCGTGGGAAGGTCCCTATCGTTTTGCACAATGAAAGTGAACGAGCAAGGTCATGGAGTCAAGTTTTTAGTGAAGATACAAAAAAACAGTCCATTCCAGTCATACAAGCTTGGCAACTAAATGAAAGAATGTATGGGGAACTGCAAGGTCTCAATAAACAAGAAACAGCCGACAGATATGGGAAAGAGCAAGTCCATGAGTGGCGCCGGAGTTATGACATACCTCCTCCAAATGGTGAAAGCTTGGAAATGTGTGCCCAAAGAGCAGTTGCCTATTTCAGAGACCAAATTGAACCACAACTTTTATCTGGAAAGAATGTTATGATTTCAGCCCATGGGAATTCATTGAGATCCATTATCATGTACCTTGATAAATTAACTTCCCAAGAGGTCATTAGTTTGGAACTGTCAACTGGAATTCCCATGCTTTACATTTTCAAAGAGGGAAGATTCATTAGGAGGGGAAGTCCCATAGGGCCTTCTGAAGCTGGAGTTTATGCCTATACAAGGCGTTTGGCTCTTTACAAGCAGAAGTTGGATGACATGTTCCAGTGA 1038 0.4229 MAAEVYYQAVGTLQSHSHLNNFNRHQKHQNNTVRLVARDFISGNGLSRRSTNRSGRRNCTVIRSLASQTSVVDPVLSPSRSNAGDSNKKSNEAALILIRHGESLWNEKNLFTGCVDVPLSKKGIDEAIEAGKRISSIPVDVIFTSALIRAQMTAMLAMTQHRRGKVPIVLHNESERARSWSQVFSEDTKKQSIPVIQAWQLNERMYGELQGLNKQETADRYGKEQVHEWRRSYDIPPPNGESLEMCAQRAVAYFRDQIEPQLLSGKNVMISAHGNSLRSIIMYLDKLTSQEVISLELSTGIPMLYIFKEGRFIRRGSPIGPSEAGVYAYTRRLALYKQKLDDMFQ 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02545 345 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 97 106 IPR001345 GO:0003824
Viun9g02545 345 Hamap 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 92 319 IPR005952 GO:0006096|GO:0016868
Viun9g02545 345 SMART PGAM_5 94 280 IPR013078 -
Viun9g02545 345 SUPERFAMILY Phosphoglycerate mutase-like 95 311 IPR029033 -
Viun9g02545 345 CDD HP_PGM_like 95 314 IPR013078 -
Viun9g02545 345 Gene3D - 84 316 IPR029033 -
Viun9g02545 345 Pfam Histidine phosphatase superfamily (branch 1) 175 298 IPR013078 -
Viun9g02545 345 Pfam Histidine phosphatase superfamily (branch 1) 95 169 IPR013078 -
Viun9g02545 345 PANTHER PHOSPHOGLYCERATE MUTASE 87 331 IPR005952 GO:0006096|GO:0016868
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02545 Viun-Chr9 34535616 34538697 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02545 K01834 - gmx:100802621 635.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g02545 9 34535616 34538697 Viun9g02545 9 34535616 34538697 ECH