Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02542 ATGTTGTTAGGGAAGAGACCTCGTCCTCCAATGAAGAGAACTACCAGCATGTCAGAGATAACCTTCGATCTCAACACAACCTTGGACGAGGATGTTCAGAACAACCCCGTCAAGGGAGGACTTGGGCCGGACCCATGGACGAAGCACCCACCGCCAGTTGGGTCGAACGGCTTAGATCAGAGCAGGGTTTGGGCCTTAGTTTCACCCAGAAACCATAGAAGGCATTCGGAAGATTCCGCACACACCCCTGAGTTTTTGCGTGTTTGCTTTCTCTGCAAACGCCGTTTAGTTCCTGCTCGTGACATCTACATGTACAGAGGTGACAGTGCTTTCTGCAGTTCAGAATGCCGAGAAAAACAGATGAAGCAGGATGAGCGAAAGGATAATAATAAGTGTGGTGTGGCATCAAAGAAACAAGTTGCAGCTACGCCTTCTGGGTCTCAAGTTAGAAGTACCAAAGGCGAAACCCTTGTTGCCTTGTAG 483 0.4928 MLLGKRPRPPMKRTTSMSEITFDLNTTLDEDVQNNPVKGGLGPDPWTKHPPPVGSNGLDQSRVWALVSPRNHRRHSEDSAHTPEFLRVCFLCKRRLVPARDIYMYRGDSAFCSSECREKQMKQDERKDNNKCGVASKKQVAATPSGSQVRSTKGETLVAL 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02542 160 MobiDBLite consensus disorder prediction 140 154 - -
Viun9g02542 160 Pfam zinc-finger of the FCS-type, C2-C2 77 127 IPR007650 -
Viun9g02542 160 PANTHER FCS-LIKE ZINC FINGER 5 1 154 - -
Viun9g02542 160 ProSiteProfiles Zinc finger FLZ-type profile. 84 128 IPR007650 -
Viun9g02542 160 MobiDBLite consensus disorder prediction 123 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02542 Viun-Chr9 34521020 34522220 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02542 - - var:108331042 322.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g02542 9 34521020 34522220 Viun9g02542 9 34521020 34522220 ECH
Viun8g01450 8 23618290 23619213 Viun9g02542 9 34521020 34522220 PCT