Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02522 ATGGGTGCATTTTTTAGTGTGGCCAGTACAAAATCTGACAAGAGGGAATGGAATGGAGTCTCTCCAAATGAGACATGTAAGAGGCAAAGAATGTCTCCTACTGTTGATGAAGAGAGTCCAAGGCTCATTCCTAATCTCCCTGATGAGTTATCACTTCAGATTATTGCTAGACTTCCTAGAATTTGTTACTTAAATGCAAGGATGGTATCCAAGAAGTGGAAGTCAACTATCATGAGTTTAGACCTGTATAAATTGAGGAAAGAACTTGGGACAACTGAAGAGTGGCTGTATCTGTTGATTAAGGCTGGAGAAAATAATCTTGTATGGCATGCTCTAGATCCTCGTTCTAAGATATGGCAGAGAGTGCCCAACATGCCCAATTTTGCTGAAGAAGAAGAACCTAGAAAAGGCTCTTCTAGGCTTTGGATGTGGAACATGGTGGAGGGTATCAGAATTGCTGAAGTTATTAGAGGTTTTCTTGGACGGAAGGATGCATTTGATGAAATGCCCTATTGCGGCTGTGCAATTGGAGCTGTTGATGGGTGTCTCTATGTTCTTGGTGGATTTTCTAAGGCTTCAACTATGAGGTGTGTGTGGCGATTTGATCCGATACAAAGTACATGGAGCAAGGTGACTCCAATGTCCACGGGTCGGGCGTACAGTAAGACAGGTGTCCTAAATAACAAGCTTTATGTTGTTGGAGGGGTTAGTCAAGGTCACGCTGGATTGGTTCCTCTCCAATCTGCTGAAGTTTTTGATCCCTCTACAGATACATGGTCGCATGTACCCAGCATGCCATTCTCCAGAGCTCAAGTCCTTCCCAGTGCCTTTTTGGCTGACATGTTAAAGCCTATTGCCACAGGGTTGACCTCATACATGGGAAGGTTGTGTGTTCCACAGAGTCTGTATTCATGGCCCTTTTTTGTTGATGTTGGGGGAGAAATCTATGATCCTGACACTAACTCATGGATAGAAATGCCTGCTGGTATGGGTGAAGGATGGCCTGCACGGCAGGCAGGAACCAAATTGAGTGTAGTAGTGGACGGTGAATTATATGCTTTTGACCCTTCTAATGCTATGGATAGTGGAAGGATCAAAGTTTATGACCGAGGTGAAGATGCTTGGAAAGTAGTTATTGGAAAAGTTCCCATATATGATTCTGCTGATTCAGAGTCTCCATATCTACTTGCTGGTTTCCATGGTAAGCTCCATGTTATCACAAAAGATGCCAATCATGATATTGCTGTTCTGCAGGCAGGTCTGCGGAATAATTTGGGTTCTTCACCATCACTCACAACTCTGTCACAAAGTACATTGCATGAATCTCCAGAACTGGCTTCTGAATCAGATGCAGCAGTTGTTTGGAGGGTTGTTGCCTGCAGAGATTTTGGGCGGGCTGAGCTAGTCAGTTGCCAAGTTATTGACATATAG 1431 0.4389 MGAFFSVASTKSDKREWNGVSPNETCKRQRMSPTVDEESPRLIPNLPDELSLQIIARLPRICYLNARMVSKKWKSTIMSLDLYKLRKELGTTEEWLYLLIKAGENNLVWHALDPRSKIWQRVPNMPNFAEEEEPRKGSSRLWMWNMVEGIRIAEVIRGFLGRKDAFDEMPYCGCAIGAVDGCLYVLGGFSKASTMRCVWRFDPIQSTWSKVTPMSTGRAYSKTGVLNNKLYVVGGVSQGHAGLVPLQSAEVFDPSTDTWSHVPSMPFSRAQVLPSAFLADMLKPIATGLTSYMGRLCVPQSLYSWPFFVDVGGEIYDPDTNSWIEMPAGMGEGWPARQAGTKLSVVVDGELYAFDPSNAMDSGRIKVYDRGEDAWKVVIGKVPIYDSADSESPYLLAGFHGKLHVITKDANHDIAVLQAGLRNNLGSSPSLTTLSQSTLHESPELASESDAAVVWRVVACRDFGRAELVSCQVIDI 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02522 476 Gene3D - 101 385 IPR015915 GO:0005515
Viun9g02522 476 ProSiteProfiles F-box domain profile. 40 86 IPR001810 GO:0005515
Viun9g02522 476 PANTHER OS02G0202900 PROTEIN 27 475 IPR045887 -
Viun9g02522 476 Pfam F-box domain 44 83 IPR001810 GO:0005515
Viun9g02522 476 Pfam Kelch motif 218 266 IPR006652 GO:0005515
Viun9g02522 476 Pfam Kelch motif 170 215 IPR006652 GO:0005515
Viun9g02522 476 MobiDBLite consensus disorder prediction 1 39 - -
Viun9g02522 476 SMART fbox_2 46 86 IPR001810 GO:0005515
Viun9g02522 476 SMART kelc_smart 182 228 IPR006652 GO:0005515
Viun9g02522 476 SMART kelc_smart 229 279 IPR006652 GO:0005515
Viun9g02522 476 SUPERFAMILY Kelch motif 96 406 IPR015915 GO:0005515
Viun9g02522 476 SUPERFAMILY F-box domain 39 84 IPR036047 GO:0005515
Viun9g02522 476 CDD F-box_AtAFR-like 42 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02522 Viun-Chr9 34306110 34308942 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g02522 36 264 Miscellaneous Gene Families AT4G33900 27.119 9.43e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02522 - - gmx:100806691 891.338
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g02522 9 34306110 34308942 Viun9g02522 9 34306110 34308942 ECH