Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02510 ATGAGCAATCTGAGAACCCTCTGTAGACCTCATACGGTGTTCTCTTTTATTAGTTGCAGACACCAGTTTCGATCTATTTCGTTTCCAAACCCTAATTGGAAGCCCCGTTTGCCGACGCCGTTTTTGTACTCTACAATCGGTTCTTGGGGTTCGAATCCATGGTTTCGCGTGAATCAGAGGAGAACTGTGGCCAAGGCATCGAATTGGACTGAACAAAAATCCCCATATGAAACTCTTGAATTGGAAGGAGATGCTGATGAGGAGCAGATAAAAATTGCTTACAGACGCTTGGCCAAATTTTATCATCCAGATGTCTATGATGGCAGAGGTAACCTTGAAGAAGGTGAAACATCAGAAGCTAGATTCATCAAGATTCAAGCTGCTTATGAATTGCTTATAGATGGAGAGAGGCGAAGACAGTATGATATTGATAACCGGGTGAACCCTATGAAGGCATCTCAGGCATGGATGGAGTGGCTTATAAAAAAGCGAAAAGCTTTTGATCAGCGGGGTGATATGGCAATTGCTGCTTGGGCTGAACAGCAACAGCGCGAGTTAAATCTTCGCGTGCGTCAACTTTCTCGTTCAAAGACTGATCCAGACGAAGCTAGGAGGATTCTGGCAAGAGAGAAGAAGGCCTCGGCCGATTATTACTCGAATACCCTTAAAAGGCACACACTTATACTGAAGAAGAGAGATTTGATGCGAAGAAAGGCCGAGGAAGAAAAGAAGAAGACTATCAGCCGGCTCTTGGCAGCAGAAGGTCTTGAACTTGATGATTCAGATAGTGATGAGGCACTCTAG 804 0.4465 MSNLRTLCRPHTVFSFISCRHQFRSISFPNPNWKPRLPTPFLYSTIGSWGSNPWFRVNQRRTVAKASNWTEQKSPYETLELEGDADEEQIKIAYRRLAKFYHPDVYDGRGNLEEGETSEARFIKIQAAYELLIDGERRRQYDIDNRVNPMKASQAWMEWLIKKRKAFDQRGDMAIAAWAEQQQRELNLRVRQLSRSKTDPDEARRILAREKKASADYYSNTLKRHTLILKKRDLMRRKAEEEKKKTISRLLAAEGLELDDSDSDEAL 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02510 267 SMART dnaj_3 73 137 IPR001623 -
Viun9g02510 267 Pfam DnaJ domain 75 142 IPR001623 -
Viun9g02510 267 Gene3D DnaJ domain 59 160 IPR036869 -
Viun9g02510 267 FunFam Chaperone protein dnaJ 60 165 - -
Viun9g02510 267 ProSiteProfiles dnaJ domain profile. 74 145 IPR001623 -
Viun9g02510 267 ProSitePatterns Nt-dnaJ domain signature. 122 141 IPR018253 -
Viun9g02510 267 SUPERFAMILY Chaperone J-domain 10 141 IPR036869 -
Viun9g02510 267 CDD DnaJ 75 134 IPR001623 -
Viun9g02510 267 PANTHER CO-CHAPERONE PROTEIN DJLA 56 259 - -
Viun9g02510 267 PRINTS DnaJ domain signature 163 182 IPR001623 -
Viun9g02510 267 PRINTS DnaJ domain signature 76 94 IPR001623 -
Viun9g02510 267 PRINTS DnaJ domain signature 94 109 IPR001623 -
Viun9g02510 267 PRINTS DnaJ domain signature 117 137 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02510 Viun-Chr9 34166079 34169124 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02510 - - vra:106762321 501.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g02510 9 34166079 34169124 Viun9g02510 9 34166079 34169124 ECH