Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02476 ATGCATCCTTTCTGCTGCGTGTCCGCCATTTCCGACCAGGCCTCGCCAGTGAAACCCTCGTTCGCGGACTTCCCCATGCCGCCTCTCCCTGCCGCCGCCGCCACCGCCGCCACCGTGAGATCCGATTCGGCTCCGCGGCACAGCCACAAGCACAGCCACAGCGGGAGTCAGCGGGAGCAGCCGGTGGACTTGAAGATCAACGACCTCGTTGGCAACGGAATCTCTGGAATACTGTACAAATGGGTGAATTACGGCAAAGGATGGCGGCCGCGATGGTTTGTACTCCAAGACGGCGTTCTCTCCTACTATAAGATTCACGGACCTGATAAGATCGTCGTGAATCCCGAAACCGAGAAAGGCTCCATGGTTATCGGCGAAGAATCCATGCGCAGGATAACTCGCAACCGCAATTCCTATCCCTGCCAGCACGTGCGAAAGCCGTTTGGGGAAATCCATCTCAAGGTTTCGACTATTCGCGAGAGCAAATCGGATGACAAGCGCTTCTCGGTTTTCACCGGAACGAAGAGGCTCCACCTGAGGGCGGATACGCGTGAGGATCGTCTGTCGTGGACGGAGGCGTTGCAGGCGGTAAAGGACATGTTCCCCCGGATGTCAAACAGCGAGTTGATGGCTCCGTTGGACAATGTAACCGTTTCGACGGAGAAACTGAGACTTCGGCTTATGGAAGAGGGAGTGAGCGAGGGGACTATTCAGGACAGTGAGCAAATCATGAGGACTGAGTTTGCGGCGCTGCAAAGCCAGCTTGTGCTGCTTAAGCAGAAGCACTCAATTCTCATTGACACTCTGCGCCAATTAGAGACAGAAAAGGTTGATCTGGAGAATACAGTAGTTGATGAGAGCCAAAGACAGTGGAATGATGAAGAGGCTTCCTCAAGATTAGCGCAAGAAAAATTTAGTGGAACCGGAAGTGAATCTGAAGATGACAATGATCGAAATGATGCTGCTGAGGAAGAAACTGACGATGATGACAATGCCTTTTTTGATACTCGTGATATTCTGTCGTCCAGTTCTTTTAAAAGTAATGGGTCTGATTACAGAATGTCATCCTTCTCTTCAGATGATGAAGGGTTCTATGCATTTGAATCAGAGGATGACATAGATCCTTCAATTAGATATGTTGGAACCAATTACCCTCATGTTAAACGGCGTAAGAAATTGCCAGACCCTGTAGAAAAAGAGAAAGGAGTCAGTCTGTGGTCAATGATTAAGGATAATATAGGGAAGGATCTAACAAAAGTTTGCCTTCCTGTTTATTTTAACGAGCCTCTTTCCTCCCTACAAAAATGTTTCGAGGAAATGGAGTACTCATATCTCTTGGACCAAGCATATGAATGGGGAAGAAGGGGTAATAGCCTCATGAGGATTCTCTATGTTGCGGCTTTTGCTGTATCTGGCTATGCTGCAACAGAAGGAAGAGTTTGCAAACCATTTAATCCATTACTTGGGGAAACATATGAGGCTCACTATCCAGATAAAGGCCTTCGGTTTTTCTCAGAGAAGGTCAGTCATCACCCTATGATTGTAGCATGTCACTGTGAGGGTACAGGTTGGAAATTTTGGGGAGATAGCAACCTAAAGAGCAAATTTTGGGGGCGATCAATTCAGCTTGACCCTGTTGGTACTTTGACTTTGGAATTTGATGATGGAGAAGTTTTCCAGTGGAGTAAGGTTACTACATCAATATACAATCTCATTTTGGGAAAACTATACTGTGATCACTATGGTACAATGCGTATAGAGGGAAATCAAGAGTACTCGTGTAAACTGAAATTCAAGGAACAATCTATAATTGATCGAAATCCTCACCAGGTTCATGGTATCATTCAAGATAGGAACGGAAAAACTGTATCAACTTTGTTTGGAAAATGGGATGAAAGCATGCATTACGTTAATGGAGACTACACCGGGAAAGGGAAAGGTCACGAATCTTTGTCAGATGCCCGTTTGCTCTGGAAGCGAAGCAAGGCTCCCAAGATTCCCACTAGATACAACTTCACTCGCTTTGCAATCACACTAAACGAACTGACCCCTGGCTTGAAGGAGAAGTTGCCACCTACAGATTCAAGGTTAAGGCCAGACCAGAGGTATTTGGAAAATGGGGAGTATGACATGGCAAATTCAGAAAAGTTAAGGCTAGAGCAGCGGCAGCGACAGGCTCGGAAGATGCAAGAGAGTGGTTGGAAACCACGGTGGTTTGCGAAGGATAAGGCGAGCGGGACATACCTTTACGTTGGAGGATACTGGGAGGCCCGACAAAGAGGAAACTGGGACTCCTGCCCTGACATCTTTGGCCAAATTCCTTCCGATCATATTTCTGACGAAGGTCAAATTACATTTTAG 2361 0.4706 MHPFCCVSAISDQASPVKPSFADFPMPPLPAAAATAATVRSDSAPRHSHKHSHSGSQREQPVDLKINDLVGNGISGILYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIVVNPETEKGSMVIGEESMRRITRNRNSYPCQHVRKPFGEIHLKVSTIRESKSDDKRFSVFTGTKRLHLRADTREDRLSWTEALQAVKDMFPRMSNSELMAPLDNVTVSTEKLRLRLMEEGVSEGTIQDSEQIMRTEFAALQSQLVLLKQKHSILIDTLRQLETEKVDLENTVVDESQRQWNDEEASSRLAQEKFSGTGSESEDDNDRNDAAEEETDDDDNAFFDTRDILSSSSFKSNGSDYRMSSFSSDDEGFYAFESEDDIDPSIRYVGTNYPHVKRRKKLPDPVEKEKGVSLWSMIKDNIGKDLTKVCLPVYFNEPLSSLQKCFEEMEYSYLLDQAYEWGRRGNSLMRILYVAAFAVSGYAATEGRVCKPFNPLLGETYEAHYPDKGLRFFSEKVSHHPMIVACHCEGTGWKFWGDSNLKSKFWGRSIQLDPVGTLTLEFDDGEVFQWSKVTTSIYNLILGKLYCDHYGTMRIEGNQEYSCKLKFKEQSIIDRNPHQVHGIIQDRNGKTVSTLFGKWDESMHYVNGDYTGKGKGHESLSDARLLWKRSKAPKIPTRYNFTRFAITLNELTPGLKEKLPPTDSRLRPDQRYLENGEYDMANSEKLRLEQRQRQARKMQESGWKPRWFAKDKASGTYLYVGGYWEARQRGNWDSCPDIFGQIPSDHISDEGQITF 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02476 786 MobiDBLite consensus disorder prediction 43 58 - -
Viun9g02476 786 Gene3D - 72 201 IPR011993 -
Viun9g02476 786 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 73 758 IPR000648 GO:0008289
Viun9g02476 786 MobiDBLite consensus disorder prediction 288 333 - -
Viun9g02476 786 FunFam Oxysterol-binding protein-related protein 2A 701 772 - -
Viun9g02476 786 SUPERFAMILY PH domain-like 74 205 - -
Viun9g02476 786 ProSiteProfiles PH domain profile. 71 199 IPR001849 -
Viun9g02476 786 Coils Coil 262 289 - -
Viun9g02476 786 MobiDBLite consensus disorder prediction 316 332 - -
Viun9g02476 786 Gene3D - 490 670 - -
Viun9g02476 786 SMART PH_update 72 201 IPR001849 -
Viun9g02476 786 Gene3D - 701 762 - -
Viun9g02476 786 Pfam Oxysterol-binding protein 404 758 IPR000648 GO:0008289
Viun9g02476 786 MobiDBLite consensus disorder prediction 37 62 - -
Viun9g02476 786 FunFam oxysterol-binding protein-related protein 1D isoform X1 490 662 - -
Viun9g02476 786 Pfam Pleckstrin homology domain 79 195 - -
Viun9g02476 786 CDD PH_ORP_plant 74 206 - -
Viun9g02476 786 SUPERFAMILY Oxysterol-binding protein-like 399 779 IPR037239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02476 Viun-Chr9 33942059 33948478 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02476 K20456 - gmx:100137077 1478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g02476 9 33942059 33948478 Viun9g02476 9 33942059 33948478 ECH