Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02397 ATGGAAGATAGTTTCGTTTTCCAGTGGAGCGATATCAGATCTCTCTTGTCCATCATTCAGTGGTGGGCTTTCAATGTCACCGTAATCATCGTCAACAAGTGGATCTTCCAGAAATTGGATTTCAAGTTTCCCCTATCAGTTTCATGCGTCCACTTTATCTGTTCAGCCATTGGGGGATATGTGGTAATAAAGGTGTTGAAACTTAAGCCACTGATAACTGTTGACCCTGAAGATCGCTGGCGAAGAATCTTTCCAATGTCGTTTGTGTTCTGTATTAACATCGTGTTGGGGAATGTGAGCCTACGATACATTCCAGTTTCTTTTATGCAGACAATAAAGTCATTCACACCTGCCACCACAGTTGTTTTGCAATGGCTAGTGTGGAGGAAGTATTTTGACTGGCGTATTTGGGCTTCTCTTGTACCCATTGTTGGAGGGATTCTTCTGACATCTGTAACAGAGCTTAGTTTTAATATGTTTGGATTTTGTGCTGCATTATTTGGCTGTCTGGCTACTTCTACAAAGACTATTCTTGCAGAATCTCTTCTGCATGGATACAAATTTGACAGCATAAACACAGTTTATTACATGGCACCTTTTGCAACCATGATCTTGGCGCTTCCTGCCCTGTTACTTGAAGGCAATGGAATCCTCGAATGGTTTGGTACCCATCCATATCCTTGGTCGGCTCTCATCATTATTTTTAGCTCCGGGGTGTTGGCTTTCTGTCTTAACTTCTCCATTTTTTACGTGATTCACTCCACCACTGCTGTAACATTTAATGTTGCCGGAAATCTTAAGGTTGCAGTGGCTGTCCTTGTTTCTTGGCTGATATTTAGGAACCCAATTTCATATTTAAATTGTGTTGGATGTGCCGTGACTCTTGTGGGCTGTACATTCTACGGTTATGTGAGGCACATGCTCTCCCAACAGCCAGCAGTCCCTGGAACTCCTCGGACCCCCAGGACTCCCAGGACCCCCCGTAGTAAGATGGAGTTGCTTCCTCTTGTAAATGATAAATTAGAAGATAAGGTCTAG 1038 0.4316 MEDSFVFQWSDIRSLLSIIQWWAFNVTVIIVNKWIFQKLDFKFPLSVSCVHFICSAIGGYVVIKVLKLKPLITVDPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHGYKFDSINTVYYMAPFATMILALPALLLEGNGILEWFGTHPYPWSALIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISYLNCVGCAVTLVGCTFYGYVRHMLSQQPAVPGTPRTPRTPRTPRSKMELLPLVNDKLEDKV 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02397 345 SUPERFAMILY Multidrug resistance efflux transporter EmrE 68 152 - -
Viun9g02397 345 Gene3D - 66 157 - -
Viun9g02397 345 SUPERFAMILY Multidrug resistance efflux transporter EmrE 219 300 - -
Viun9g02397 345 PANTHER SOLUTE CARRIER FAMILY 35 15 305 - -
Viun9g02397 345 FunFam UDP-galactose transporter 1-like 47 158 - -
Viun9g02397 345 Pfam Triose-phosphate Transporter family 15 301 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02397 Viun-Chr9 33412519 33416876 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g02397 1 345 Organic Solute Cotransporters AT1G77610 89.017 0.0 617
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02397 K26222 - gmx:100778350 660.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g02397 9 33412519 33416876 Viun9g02397 9 33412519 33416876 ECH