Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02396 ATGAATGCCTATATTTTCGGTATCGTCGTTCCTCTCCTCGTCATCCTCTTCCGCAGCCGCAGTTCCATCAAGCGCCGCGGCCTCCCAGCTGACGTTGGCGGCGAGCGCGGCCTCACGCTGCGGAACCACCGCTTCACTACGCCGCTCACTTCTGCCTGGGAGGGCGTCACGACCCTGGCGGAGCTCTTCGAGCGCGCATGCAGTGAGCATCATGACCGTTTGCTGCTCGGTACGCGCGAGCTGATCACGCGTGAAATTGAGGTCTCTCGTGATGGTAGAAGCTTCGAGAAGCTTCACCTCGGGGACTACCGGTGGCTTACTTACGGGAAAGTCTTCCAATCCGTCACGAGTTTCGCTTCCGGTTTGGCGTTGCTCGGTCATCGCAGGGAAGAGCGCGTGGCTATATTCGCTGATACCAGAGATCGTTGGTTTATTGCACTGCAGGGATGCTTCAGGAGGAATGTGACAGTTGTGACCATATATTCGTCGTTGGGAGAGGAAGCTTTGTGTCACTCGTTGAATGAGACAGATGTCACAACAGTGATTTGTGGGCGCAAAGAATTGACATCACTAGTACATATCAGTGGTCAACTTGATTCTGTGAAACGTGTTATATGCATGGATGACAAAATTCCATCTGATTTGTCTGCTCAGACTGGATGGGAAATCACTTCCTTTTCTGACGTTGAGAGGCTTGGTAGAGACAATCCTGTAGAGGCTGATTTACCCCTTTCAGCCGATGTTGCAGTTATAATGTACACAAGTGGAAGTACAGGATTACCCAAGGGTGTAATGATGACACATGGCAATGTCTTGGCAACAGTCTCTTCGGTAATGATTATAGTTCCTAACCTTGGGCCAAAGGATGTCTATCTTGCCTACTTACCGATGGCTCACATCCTTGAATTAGTAGCTGAGAATTTGATTGCAGCTGTTGGAGGTAGTATAGGATATGGAACTCCCTTGACTTTAACTGATACATCAAACAAAATAATGAGGGGGAAAAGGGGGGATGCCACTGCATTGATGCCAACTGTGATGGCAGCTGTACCAGCAATTCTTGATCGTGTACGCGAAGGAGTGCTCAAGAAGGTAAATGCAAAAGGAGGAATGTCAAAGAAATTGTTTTATTTGGCCTTTGCACGAAGGTTGCATGCACTTAATGGTGGCTGGTTTGGGGCTTGGGGCTTAGAAAAAGCTCTGTGGAATCTTCTTGTGTTCAAGAAGGTTCAAGCAATTTTGGGTGGTCGCATTCGGTTTATACTGTGTGGTGGTGCTCCACTTTCTGGTGACACCCAAAGATTCATCAACATTTGTCTTGGTGCTCCAATAGGTCAAGGATATGGTCTCACTGAGACGTGTGCTGGTGGGACATTCTCTGATTTCGACGATACGTCTGTGGGCCGTGTTGGGCCACCTATTCCTTGCTCATATATTAAACTAATTGACTGGCCCGAAGGTGGATATTCAACTAATGACATGCCCATGCCTCGTGGTGAAATTGTGGTTGGCGGTGCAAATGTCAGTCTTGGCTACTTCAAAAATGAAGAAAAAACAAGAGAATCTTACAAGGTTGATGAAAGAGGAGTAAGGTGGTTCTACACTGGTGACATTGGGAGATTCCATAAAGATGGTTGCATTGAGATCATTGATCGGAAAAAGGACATAGTTAAACTACAGCATGGAGAATATGTGTCCTTGGGAAAGGTGGAGGCAGCTCTTTCTACCAGTCCCTACGTCTCCAATATCATGTTGCATGCTGACCCTTTTCATAGCTACTGTGTGGCACTTGTGTCAGTTTCTCGTCCGGCATTGGATCAATGGGCTTCATACCAAGGAATTGCTTATTGTAGTTTTTCAGAACTGTGCGAGGAAGAAGAAACTGTGAACGAGGTGCATGCATCACTTGTAAAGGAAGCAAAGAAGGCTCGTTTGGAAAAGTTTGAAATTCCTGCAAAAATTACTTGCCTTTCTGAGCCATGGACTCCTGAAAGTGGCCTAGTCACTGCAGCTCTTAAGCTCAAGAGAGAGGTAATTAGAAAGACTTTTCAAGAGGAGCTTGCAAAGTTATATGCCTCCGACTAG 2085 0.47 MNAYIFGIVVPLLVILFRSRSSIKRRGLPADVGGERGLTLRNHRFTTPLTSAWEGVTTLAELFERACSEHHDRLLLGTRELITREIEVSRDGRSFEKLHLGDYRWLTYGKVFQSVTSFASGLALLGHRREERVAIFADTRDRWFIALQGCFRRNVTVVTIYSSLGEEALCHSLNETDVTTVICGRKELTSLVHISGQLDSVKRVICMDDKIPSDLSAQTGWEITSFSDVERLGRDNPVEADLPLSADVAVIMYTSGSTGLPKGVMMTHGNVLATVSSVMIIVPNLGPKDVYLAYLPMAHILELVAENLIAAVGGSIGYGTPLTLTDTSNKIMRGKRGDATALMPTVMAAVPAILDRVREGVLKKVNAKGGMSKKLFYLAFARRLHALNGGWFGAWGLEKALWNLLVFKKVQAILGGRIRFILCGGAPLSGDTQRFINICLGAPIGQGYGLTETCAGGTFSDFDDTSVGRVGPPIPCSYIKLIDWPEGGYSTNDMPMPRGEIVVGGANVSLGYFKNEEKTRESYKVDERGVRWFYTGDIGRFHKDGCIEIIDRKKDIVKLQHGEYVSLGKVEAALSTSPYVSNIMLHADPFHSYCVALVSVSRPALDQWASYQGIAYCSFSELCEEEETVNEVHASLVKEAKKARLEKFEIPAKITCLSEPWTPESGLVTAALKLKREVIRKTFQEELAKLYASD 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02396 694 Gene3D - 49 552 IPR042099 -
Viun9g02396 694 ProSitePatterns Putative AMP-binding domain signature. 251 262 IPR020845 -
Viun9g02396 694 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 41 691 - -
Viun9g02396 694 SUPERFAMILY Acetyl-CoA synthetase-like 54 691 - -
Viun9g02396 694 Pfam AMP-binding enzyme 101 560 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02396 Viun-Chr9 33394965 33400588 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g02396 24 692 Acyl Lipid Metabolism Gene Families AT2G04350 62.556 0.0 896
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02396 K01897 - gmx:100778889 1212.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g02396 9 33394965 33400588 Viun9g02396 9 33394965 33400588 ECH