Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02392 ATGGCGCAAACCATGTTGCTCATGTCCAGTGTCTCTAGCAGCCACTCCCTGGGTTTGAAGAAGGATCTTTTCCTCCAATTGAGGCCTAAATTCTCTCAACTCTCCTTCAACCCTCTTCCATCTTCAACTCCTTTCCCTTCTTCACCTCGTACATTCACAACTCTCGCCCTCTTCAAATCAAAGACCAAGGCCCCTCCTGCCAAGACCAAGCCAAAGCAAAAGGTTGAAGATGGTATCTTTGGTACTTCTGGAGGGTTTGGTTTTACTAAGCAGAACGAGCTCTTTGTGGGTCGTGTTGCCATGCTTGGTTTTGCGGCATCATTGTTGGGTGAAGGAGTAACTGGGAAAGGGATTCTTGCACAATTGAATCTGGAAACTGGAATTCCCATTTATGAAGCAGAGCCACTTCTTCTGTTTTTCATCCTTTTCACGCTGCTGGGAGCTATCGGAGGTTTAGGTGACCGTGGGAAATTTGTTGACGATGAGGAACCCAACACCGGAGGTGTTATTCCCGGAGGCAAAGGCTTCAGAGAAGCACTTGGTCTCGGTTCAGGTCCTTTGTTTGGATTCACGAAAGCTAACGAGCTATTTGTGGGAAGATTGGCTCAATTGGGATTCGTTTTCTCTCTGATTGGAGAAATTGTTACTGGGAAGGGAGCACTCGCCCAGCTCAACATTGAGACCGGTGTACCGATCAACGAAATCGAACCCCTTGTCTTGTTCAACGTTCTTTTCTTCTTCGTTGCAGCTTTGAATCCTGGAACTGGCAAATTCGTTACAGATGAGGGGGATGATGAATAG 801 0.4707 MAQTMLLMSSVSSSHSLGLKKDLFLQLRPKFSQLSFNPLPSSTPFPSSPRTFTTLALFKSKTKAPPAKTKPKQKVEDGIFGTSGGFGFTKQNELFVGRVAMLGFAASLLGEGVTGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGGLGDRGKFVDDEEPNTGGVIPGGKGFREALGLGSGPLFGFTKANELFVGRLAQLGFVFSLIGEIVTGKGALAQLNIETGVPINEIEPLVLFNVLFFFVAALNPGTGKFVTDEGDDE 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02392 266 SUPERFAMILY Chlorophyll a-b binding protein 53 244 - -
Viun9g02392 266 Gene3D Chlorophyll a/b binding protein domain 50 129 - -
Viun9g02392 266 FunFam Photosystem II 22 kDa protein, chloroplastic 133 235 - -
Viun9g02392 266 PANTHER UPF0041 BRAIN PROTEIN 44-RELATED 66 126 - -
Viun9g02392 266 Pfam Chlorophyll A-B binding protein 78 210 IPR022796 -
Viun9g02392 266 Gene3D Chlorophyll a/b binding protein domain 130 236 - -
Viun9g02392 266 FunFam Photosystem II 22 kDa protein, chloroplastic 52 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02392 Viun-Chr9 33371905 33373254 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02392 K03542 - gmx:100807355 400.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g02392 9 33371905 33373254 Viun9g02392 9 33371905 33373254 ECH