Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02350 ATGAGCTTATTGAGGCCTTCTGCAATATACAACTTCGTAACAAGTTATCCTTCGCTGCGATGGATGCCGTGTCAGAGTTGGGGCTTCCTTCGATGGCCGGGTCTCGACGGATTCCTTAGGCTTATGGTCGTTGGACTTCTCTGGTCCACGTTCTCCGAGCTTCGCTTCATACCTTCCTCTTCTATGTTCCCCACTCTTCGTGTTGGTGATCGAATTATTGTGGAAAAGTTATATGGAGAAAACACAGAAACTGTTTTTATTAAGAGAATTGTAGCAAAAGCAGGAGACGCTGTTGAGGTTCATCATGGGGTACTCTACGTCAATGGTGTTGCTCAGCAGGAAGATTTCATAGCACAACCACCAGCATACACAATTCCATTAACCACTGTGCCCAATGACCATGTTTATGTGCTAGGCGATAATCGTAATAACAGTTATGATTCTCATGTGTGGGGACCACTTCCTATGAAGAACATAATTGGAAGATATGTCACTTGTTATCATAGACCAACAAACATTTGA 522 0.4349 MSLLRPSAIYNFVTSYPSLRWMPCQSWGFLRWPGLDGFLRLMVVGLLWSTFSELRFIPSSSMFPTLRVGDRIIVEKLYGENTETVFIKRIVAKAGDAVEVHHGVLYVNGVAQQEDFIAQPPAYTIPLTTVPNDHVYVLGDNRNNSYDSHVWGPLPMKNIIGRYVTCYHRPTNI 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02350 173 ProSitePatterns Signal peptidases I serine active site. 59 66 IPR019756 GO:0004252|GO:0016020
Viun9g02350 173 ProSitePatterns Signal peptidases I signature 3. 135 148 IPR019758 GO:0004252|GO:0016020
Viun9g02350 173 SUPERFAMILY LexA/Signal peptidase 51 167 IPR036286 -
Viun9g02350 173 CDD S26_SPase_I 53 162 IPR019533 GO:0004252|GO:0006465
Viun9g02350 173 PRINTS Bacterial leader peptidase 1 (S26A) family signature 50 66 IPR000223 GO:0006508|GO:0008236|GO:0016020
Viun9g02350 173 PRINTS Bacterial leader peptidase 1 (S26A) family signature 130 149 IPR000223 GO:0006508|GO:0008236|GO:0016020
Viun9g02350 173 Pfam Signal peptidase, peptidase S26 39 165 IPR019533 GO:0004252|GO:0006465
Viun9g02350 173 PANTHER SIGNAL PEPTIDASE I 37 77 IPR000223 GO:0006508|GO:0008236|GO:0016020
Viun9g02350 173 Gene3D Umud Fragment, subunit A 59 169 - -
Viun9g02350 173 NCBIfam signal peptidase I 41 167 IPR000223 GO:0006508|GO:0008236|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02350 Viun-Chr9 33002105 33005062 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02350 K03100 - gmx:100306121 302.367
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g02350 9 33002105 33005062 Viun9g02350 9 33002105 33005062 ECH