Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02286 ATGGCTCTGGAGAAGTGTTTAGGAGTAACCACAGTGCGCACAGCCACACCCCAATGCCTTTCTCCGTGTTTTCCAACTTCAAGGGAAAAGCTGGTTTTCCCAACTCACAGAGGTTTCAAGAAATCCATGCCAAACACAAAACTCTCATACCAATCTCTCTATTCAACCTACCGAAAATCCCGTTTTGTTTGTAATGCTCGTGAAGCGGTAAATGAAGTGAAAGTGGTGACTGACTCAAGCTGGGGAACACTTGTGATAGCCAATGAAACCCCTGTTCTGGTAGAATTTTGGGCACCATGGTGTGGTCCGTGCAGGATGATAGCACCTGTTATCGATGAGTTAGCGAAGCAATATGGTGACAAAATTGCATGCTACAAGCTTAACACAGATGACTCCCCAAACATAGCAACTCAGTACGGCATCAGAAGCATACCAACAGTTCTGTTCTTCAAGAATGGAGAGAAAAAAGAAAGCATAATTGGTGCAGTTCCCAAGTCTACACTGTCAGCGACAATTGAAAAATACATTGATTCATAA 537 0.4358 MALEKCLGVTTVRTATPQCLSPCFPTSREKLVFPTHRGFKKSMPNTKLSYQSLYSTYRKSRFVCNAREAVNEVKVVTDSSWGTLVIANETPVLVEFWAPWCGPCRMIAPVIDELAKQYGDKIACYKLNTDDSPNIATQYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSATIEKYIDS 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02286 178 ProSiteProfiles Thioredoxin domain profile. 42 178 IPR013766 -
Viun9g02286 178 FunFam Thioredoxin 67 176 - -
Viun9g02286 178 ProSitePatterns Thioredoxin family active site. 93 111 IPR017937 -
Viun9g02286 178 CDD TRX_family 85 173 - -
Viun9g02286 178 PANTHER GEO12009P1 67 177 - -
Viun9g02286 178 SUPERFAMILY Thioredoxin-like 61 177 IPR036249 -
Viun9g02286 178 Gene3D Glutaredoxin 73 177 - -
Viun9g02286 178 NCBIfam thioredoxin 77 175 IPR005746 GO:0015035
Viun9g02286 178 Pfam Thioredoxin 73 174 IPR013766 -
Viun9g02286 178 PRINTS Thioredoxin family signature 92 100 - -
Viun9g02286 178 PRINTS Thioredoxin family signature 100 109 - -
Viun9g02286 178 PRINTS Thioredoxin family signature 140 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02286 Viun-Chr9 32256890 32258550 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02286 K03671 - gmx:100305596 316.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g02286 9 32256890 32258550 Viun9g02286 9 32256890 32258550 ECH