Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02263 ATGCCACCAGCAGTGTCATCTACTTTTGAGTCAGAGAGAGACCCTGTGATATATGTGCACACAGTTTCAGAGGCTGGTCGTCTTCTTCCTTCAGCTAGCCGCTGGAACTCTATAGCACTTGACTTTAAACTTGCTCCTCATTCTTCCACTGCCTATGAATCAATCCCTTCCCAATACCCAAAATCTGTTGACTACAATCTTGTTATCACTGACAGGAAGCATTTTCATTGTTTTCTTTTTGTTCTTGTAACAATAATCTTAGCCATCCTAGCAGCTGTTTTGTTGGTGCATTTTTTACCTCAGAAGCACAAGCATCAAGGCTCTTCAATCGATCTCAAAGTGGCAATAAACCAAGCTCTAACATTTTATGATGCCCAAAAATCTGGGCATTATCCGAGGAACAGTCCAGTTAAATTTCGGGGAGATTCAGGATTAAAAGATGGGGATTCCGCTAACAATGATCTTACTGGTGGATTTTATGATTCTGGCAACAACATTAAGTTTACCTTCACCACAGCTTACACCATGACCTTGTTGAGTTGGACTGTCATGGAATATCAAAGTAAATATGCTGATATTGGTGAACTTGATCATGTTAGGGACATCATTAGATGGGGCAGTGACTACCTGCTCAAGGTGTTCACTCCCCCAAATTCAGCAGATGGATCAAACTTGATGCTGTATTCCCAGGTTGGAAGTACCATTAGTATCAACAATGAACCTAATGATTTGAGTTGCTGGCAACGACCCGAAGATATGAAATATGAGAGACCAGTTTCAATTTGCAATGGCTCTGCTACAGATTTAGCTGGTGAAATTGTTGCAGCATTATCTGCAGCATCGATGGTATTCAAGGAGGACAGAGATTACTCAAAGAGACTTAAGGATGCAGCAGAAGGGCTCTTTGGGGCAATACCTACCAAACAAGGGACTCACACCATGGTTGATGCATGTGGAAAACAAGCAACAATGCTTTATAACTCAACCAGCTACCAAGATGAGTTGGCTTGGGGTGCAACATGGTTATTTCTTGCTACTGCAAACACTAATTACCTTGAAATTGCAACTGAAACTTTTTTTTCAGCCAAGAGTAGTGAATCAAGCGTTGACAAAGGGGTTGTTTACTGGAATAACAAGCTCAATGCAGTGGAGGTTTTGCTAACCGGTATTCGATACTTCCGTGATCCTGGCTTCCCATACGAGGATGTTCTGAAACTTTCATCTAACTCAACCGATGCACTCATGTGTTCTTATGTATTCAATAAATACTTTAGCAGGACACCTGGTGGGTTGATTATCCTGAAACCTGATTATGAACCATTGCTCCAGTTTGCTGCTACAGCATCTTTTCTCAGTAAATTATACAGCGATTACCTTGATCATCTCAAAATGTCTAGTGCAAGTTGCAAGACTGATACATTCTCCGTGAAAATGCTTCGCGATTTTGCCACTTCTCAGGTTAACTACATATTGGGGCAGAACCCTTTGCAAATGAGTTATTTAGTGGGCTATGGTGACAGGTATCCTGTCCAAGTTCATCACAGAAGTGCATCAATCCCTTGGAATAACCAACCTTACAATTGTGACGATGGTAAGAAATGGCTAAACTCCAAAGATCCAAATCCACAAGTTCTTTTGGGAGCCATGGTGGGAGGGCCAGACACTAATGATAATTTCATGGATCAGAGGACCAACCAAAAGTTCACTGAACCGAACATAGCCAGTAATGCAGGCTTAGTTGCAGCACTGATTGCGCTTCAAGATCCTCCTTATAGTTCACGTGACCTAAAGAGCACATTGTGGGGATGGACTTGA 1815 0.4187 MPPAVSSTFESERDPVIYVHTVSEAGRLLPSASRWNSIALDFKLAPHSSTAYESIPSQYPKSVDYNLVITDRKHFHCFLFVLVTIILAILAAVLLVHFLPQKHKHQGSSIDLKVAINQALTFYDAQKSGHYPRNSPVKFRGDSGLKDGDSANNDLTGGFYDSGNNIKFTFTTAYTMTLLSWTVMEYQSKYADIGELDHVRDIIRWGSDYLLKVFTPPNSADGSNLMLYSQVGSTISINNEPNDLSCWQRPEDMKYERPVSICNGSATDLAGEIVAALSAASMVFKEDRDYSKRLKDAAEGLFGAIPTKQGTHTMVDACGKQATMLYNSTSYQDELAWGATWLFLATANTNYLEIATETFFSAKSSESSVDKGVVYWNNKLNAVEVLLTGIRYFRDPGFPYEDVLKLSSNSTDALMCSYVFNKYFSRTPGGLIILKPDYEPLLQFAATASFLSKLYSDYLDHLKMSSASCKTDTFSVKMLRDFATSQVNYILGQNPLQMSYLVGYGDRYPVQVHHRSASIPWNNQPYNCDDGKKWLNSKDPNPQVLLGAMVGGPDTNDNFMDQRTNQKFTEPNIASNAGLVAALIALQDPPYSSRDLKSTLWGWT 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02263 604 Gene3D - 109 589 IPR012341 GO:0005975
Viun9g02263 604 PANTHER ENDO-1,4-BETA-GLUCANASE 85 587 - -
Viun9g02263 604 SUPERFAMILY Six-hairpin glycosidases 115 588 IPR008928 GO:0005975
Viun9g02263 604 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 489 515 IPR018221 -
Viun9g02263 604 Pfam Glycosyl hydrolase family 9 115 583 IPR001701 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02263 Viun-Chr9 32023314 32025604 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g02263 61 586 Glycoside Hydrolase AT5G49720 45.455 6.25e-148 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02263 K01179 - gmx:100805472 1056.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g02263 9 32023314 32025604 Viun9g02263 9 32023314 32025604 ECH