Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02243 ATGGCTTCGGAGAAAATCGAGCGAACTGCAATTGAAATGAACAATGAGGATACAAATTTGAGGGAACATTCTTCTCCTCCTCCTCCTCCATCGCAAAAATCATCCAAAACTCAAAATTTGGGAATCACAGAAAGATCTTTCTCTGCTGCAGGCGCCGCCTTCTTTTCAGTCATCATTGCCAATCCCCTCGATGTTGCCAAGACAAGGTTGCAAGCACAAGCAGCAGGGGTTGCATATTCTCATCCACTCAGTAATATGACTAGTAGAATGGCTTGTTTTGGCCCAAATATGATGTTTGCTGATTTAAGGTGTTCTCCATCATGCCACCGGGCTGGAATCCAAGGAACAGTGTCCATCTGTCCTCCTGAGTGCTTTCGTTACAAAGGAACACTGGATGTCATCAACAAAATTATCCATCAGGAGGGAGTTGGTAAGCTGTGGAGAGGCACAAATGCTGGCCTGGTTCTTGCAGTACCAACTGTGGGAATCTACCTTCCTTGCTATGACATTTTACGCAATTGGTTGGAGGATTTCACAGCTAAAAATGCTCCAACTACAGTTCCTTATGTACCGTTAGTGGCTGGTTCATTGGCGCGCTCTCTAGCTTGTGCAACTTGCTATCCTATTGAACTTGCTAGAACTCGTATGCAGGCATTTAAAGTAACTCAAATTGATAAAAAGCCTCCTGGAGTGTTTCAGACACTGCTTGGTGTTATGTCGCATGTCAAAAGCACAAATCATCCACAAAGTAATTTGCGAGGTTATCGTCTTTTGTGGACTGGCATGGGAGCTCAACTTGCTCGTGATGTACCCTTCTCTGCCATTTGTTGGTCCACACTTGAACCAACTAGAAGAAAACTTCTTAGTTTTGCTAGACATGATGAGGCTAATGTGTTTAGTGTTGTTGGAGCAAATTTCGGAGCTGGTTTTCTTGCTGGAACTATAGCAGCTGGAGTTACATGTCCTTTAGATGTTGCAAAGACTCGAAGGCAGATAGAGAAGGATCCTATGAAGGCATTGAAAATGACTACGAGACAAACATTAATGGATGTGTGGAGAGATGGAGGCTTGAAAGGATTGTTTGCAGGTTTTGGTCCACGAGTTTGTCGATTAGGGCCTTCTGTTGCATTAGTGATTTCGTTTTATGAAGTTGTCAAGTTTGGTCTGCATCGTCAACACTACAACACATCATCATGA 1197 0.4353 MASEKIERTAIEMNNEDTNLREHSSPPPPPSQKSSKTQNLGITERSFSAAGAAFFSVIIANPLDVAKTRLQAQAAGVAYSHPLSNMTSRMACFGPNMMFADLRCSPSCHRAGIQGTVSICPPECFRYKGTLDVINKIIHQEGVGKLWRGTNAGLVLAVPTVGIYLPCYDILRNWLEDFTAKNAPTTVPYVPLVAGSLARSLACATCYPIELARTRMQAFKVTQIDKKPPGVFQTLLGVMSHVKSTNHPQSNLRGYRLLWTGMGAQLARDVPFSAICWSTLEPTRRKLLSFARHDEANVFSVVGANFGAGFLAGTIAAGVTCPLDVAKTRRQIEKDPMKALKMTTRQTLMDVWRDGGLKGLFAGFGPRVCRLGPSVALVISFYEVVKFGLHRQHYNTSS 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02243 398 Gene3D Mitochondrial carrier domain 19 93 IPR023395 -
Viun9g02243 398 ProSiteProfiles Solute carrier (Solcar) repeat profile. 186 286 IPR018108 -
Viun9g02243 398 ProSiteProfiles Solute carrier (Solcar) repeat profile. 300 388 IPR018108 -
Viun9g02243 398 Pfam Mitochondrial carrier protein 40 176 IPR018108 -
Viun9g02243 398 Pfam Mitochondrial carrier protein 190 287 IPR018108 -
Viun9g02243 398 Pfam Mitochondrial carrier protein 303 390 IPR018108 -
Viun9g02243 398 ProSiteProfiles Solute carrier (Solcar) repeat profile. 40 174 IPR018108 -
Viun9g02243 398 MobiDBLite consensus disorder prediction 1 39 - -
Viun9g02243 398 PANTHER FI19922P1-RELATED 24 392 IPR045315 GO:1990542
Viun9g02243 398 MobiDBLite consensus disorder prediction 1 19 - -
Viun9g02243 398 SUPERFAMILY Mitochondrial carrier 42 384 IPR023395 -
Viun9g02243 398 Gene3D Mitochondrial carrier domain 114 394 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02243 Viun-Chr9 31878251 31881806 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g02243 192 386 Organic Solute Cotransporters AT4G26180 24.645 5.00e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02243 K15119 - gmx:100778501 628.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g02243 9 31878251 31881806 Viun9g02243 9 31878251 31881806 ECH