Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02213 ATGAAGGGCGAGAGTAGCAGTAGCAGTAGCAGAGGAGTAATGGAAAAGAAGAACATGGCGATTCTGCCGTGGGAACTCGTAATCGGAATTCTGTTGATGCTGCCAGTGAAATCCCTCGTTCGTTTCAAATGTGTATGTAAGTCATGGCTTTCTCTTCTCTCTGATCCACACTTTGCAATATCACATTTTCAACGACTCACCGCAAGCTCTAGCAGACTTTTGTTCATAGCGCCTCCTGCACTTGAAATCCGATCCATAGATTTCAATGCATCCCTTCACGATGATTCTGCATCTTCTACCTTAAACCTCAACTTTCTACCTCCCAGTACTTATCATAATGTTCAGTTAATAGGTTCCTGCAGAGGGTTTTTACTTCTGAACTGTTGTCAAAGTCTCTGGGTGTGGAATCCATCCACTGGTGTCCACAGAAAATTGTCTTCCACCCCTATTGAGTCCAATTTGATGCAAGCCATGTTTTTTACATTTCTCTATGGTTTCGGGTATGACCCATCAACCGATGACTATTTGGTGGTTAAAGCGTCACACAATCCAATGTCGCTCGGTAGTGCCACCACCCGTGTGGAGTTTTTGTCGCTCAGAACTAATGTGTGGAGAGATGTTGAGGCTACCCATTTGTCTTATATGAACTCCTCTAAGGGTATCAAGGGCATCAGAGAAGGGTCGCTTTTGAATGGTGCTATTCATTGGTTGGCTTTTTGCTGTAATGGATCGATGGATGTCATTGTTGTCTTTGATCTAACTGAAAGGAGTTTCTCAGAGATACTTTTGCCGGTTGAGTTTTTAGATTATGAGTCTAATTGTTGTGATTTGGCGGTGCTTGGGGACTTGCTTAGTATATGTTTTGGGGAGTGGGACCATTCAGTGGAGATATGGGTGATGGAAGAGTACAGAGTGCAGTCATCTTGGACTAAGACTATTATTGTGTCTGCTGAAAACATTCCTGCTGCTATGTACTTCTTCCCAATATGCTATACAAAAGATGGTCATATTTTTGGGACTGATGGTTGGACTGGATTGGCAAAATATAATGGCAAGGGACAGTTGCAAGAGCATCGGTCCTATAGTCAAGGTTCTTATCGATCTCAGGTGGCTGTGTATACAGAGTCTCTGCTTTCATTCCCCATGTAA 1149 0.4317 MKGESSSSSSRGVMEKKNMAILPWELVIGILLMLPVKSLVRFKCVCKSWLSLLSDPHFAISHFQRLTASSSRLLFIAPPALEIRSIDFNASLHDDSASSTLNLNFLPPSTYHNVQLIGSCRGFLLLNCCQSLWVWNPSTGVHRKLSSTPIESNLMQAMFFTFLYGFGYDPSTDDYLVVKASHNPMSLGSATTRVEFLSLRTNVWRDVEATHLSYMNSSKGIKGIREGSLLNGAIHWLAFCCNGSMDVIVVFDLTERSFSEILLPVEFLDYESNCCDLAVLGDLLSICFGEWDHSVEIWVMEEYRVQSSWTKTIIVSAENIPAAMYFFPICYTKDGHIFGTDGWTGLAKYNGKGQLQEHRSYSQGSYRSQVAVYTESLLSFPM 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02213 382 NCBIfam F-box protein interaction domain 118 327 IPR017451 -
Viun9g02213 382 Pfam F-box associated domain 229 320 IPR013187 -
Viun9g02213 382 Gene3D - 8 58 - -
Viun9g02213 382 SUPERFAMILY F-box domain 13 143 IPR036047 GO:0005515
Viun9g02213 382 SMART fbox_2 22 62 IPR001810 GO:0005515
Viun9g02213 382 Pfam F-box domain 22 57 IPR001810 GO:0005515
Viun9g02213 382 CDD F-box_AtFBW1-like 20 58 - -
Viun9g02213 382 ProSiteProfiles F-box domain profile. 16 66 IPR001810 GO:0005515
Viun9g02213 382 PANTHER OS02G0783600 PROTEIN 28 316 - -
Viun9g02213 382 SUPERFAMILY Galactose oxidase, central domain 132 345 IPR011043 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02213 Viun-Chr9 31580161 31583936 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02213 - - gmx:100809732 506.138