Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02038 ATGCTGTCACTCTCACTCACTCTTGCTCCACACTATCATCCCCTTCCTTCAGCTTCACCAAAAATCCTCCATCTTCATTCTCCTTCATCCACGCTCTTTCCAATGGCCACTCTCTTTAGTTTTCACACCACCCTTCGCCCCTCTTGCTATCTTCCATCATCACCCTCCTCACTTCCACACCCCTTCTCCAACACCCTCTCCACAACTTTCTTCGGCAACACTGTAAGCCTCAAATATGCTGCCACTTCCACAACCAACAGTGCCCGTTCACTCTCTGCTCGCATGTCATGGGACGGTCCTCTCTCTTCCGTCAAATTGATCATTCAGGGTAAAAATCTCGAGCTCACTGATCCTGTGAAGGAGCACGTGGAAGATAAGGTGGGAAAGGCGGTGCAGAAGCATAGTCACTTAGTGAGAGAGGTTGATGTGAGACTTTCTACTAGAGGAGGAGGTGAATTTGGGCGAGGACCCAGAACTCGTAGGTGTGAGGTGACTTTGTTCACTAAGAGGCACGGAGTGTTGCGGGCTGAGGAGGACGCTGAAAGCACCTACGGAAGTATAGATTTGGTATCATCAATCATTCAGAGAAAGTTGAGGAAAATAAAGGAAAAGGAGTCGGATCATGGTCGCCACATGAAGGGTTTCAATAGGTTGAAGGTTAGGGAGCCGGTGGAGCAATTACCTGTGACAGAGGATGAAATATTATCCCCAGAGGAGGAAGAAGAATCAATTGATGAGGTTGTTCGCACAAAGTACTTTGACATGCCACCCTTGACTGTGTCTGAAGCAATAGAGCAACTTGTAAATGTTGATCATGACTTCTATGGTTTTCGAAACGAAGAAACTGGGGAAATTAATATTGTGTATAAAAGAAAAGAAGGTGGATATGGACTCATTATACCCAAAGGGGATGGTGAAGCAGAGAAATTGGAGCCTGTTGTGCTTGAACCAGCTGCAGAACCCTCCCTGAAAGAATGA 978 0.4663 MLSLSLTLAPHYHPLPSASPKILHLHSPSSTLFPMATLFSFHTTLRPSCYLPSSPSSLPHPFSNTLSTTFFGNTVSLKYAATSTTNSARSLSARMSWDGPLSSVKLIIQGKNLELTDPVKEHVEDKVGKAVQKHSHLVREVDVRLSTRGGGEFGRGPRTRRCEVTLFTKRHGVLRAEEDAESTYGSIDLVSSIIQRKLRKIKEKESDHGRHMKGFNRLKVREPVEQLPVTEDEILSPEEEEESIDEVVRTKYFDMPPLTVSEAIEQLVNVDHDFYGFRNEETGEINIVYKRKEGGYGLIIPKGDGEAEKLEPVVLEPAAEPSLKE 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02038 325 FunFam Ribosome-binding factor PSRP1, chloroplastic 106 209 - -
Viun9g02038 325 FunFam ribosome-binding factor PSRP1, chloroplastic 257 308 - -
Viun9g02038 325 Pfam Sigma 54 modulation/S30EA ribosomal protein C terminus 245 298 IPR032528 -
Viun9g02038 325 SUPERFAMILY Ribosome binding protein Y (YfiA homologue) 105 211 IPR036567 -
Viun9g02038 325 Gene3D - 105 216 IPR036567 -
Viun9g02038 325 CDD RaiA 105 204 IPR003489 GO:0044238
Viun9g02038 325 Pfam Sigma 54 modulation protein / S30EA ribosomal protein 107 204 IPR003489 GO:0044238
Viun9g02038 325 Hamap Ribosome hibernation promoting factor [hpf]. 104 302 IPR034694 -
Viun9g02038 325 NCBIfam ribosome-associated translation inhibitor RaiA 105 209 IPR003489 GO:0044238
Viun9g02038 325 PANTHER 30S RIBOSOMAL PROTEIN 90 311 - -
Viun9g02038 325 Gene3D - 257 306 IPR038416 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02038 - - gmx:100803327 477.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g02038 9 30243374 30245419 Viun9g02038 9 30243374 30245419 ECH