Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02035 ATGTCTAAAATCACAATAACCTCTCCAAAACACTGTGGTGCCAAAGAAGGGTTGAAAATTAAGAGCAACTACAAGAAGCTCTACTTCACTCTGTCAGCATTATTTACCTCAATTCTGCTGCTAATACTTCTCATCTGGCTCATCCTCCACCCTGCCAAGCCTCAATTCTCCCTCAAAGAAGTTGACATCTACCAGCTCAGTCTCTTAGGCCCCAACCTCAACTCCTCCATCCAACTCACCCTCTTCTCCAAAAACCCAAACCAGAAAGTCGCCATTTACTATGACGAGATTCAAGTTTATGCAACCTACAAGGGCCAGCAAATTACCGGTGACACTCCTGTGCCACCCTTCTACCAGGGCCAAGAAGAGAGTAACCTCATAACGGCCTCTTTGGTGGGAAACATTTTACCTGTGGCTCCCTCTCTCGGCTTCGAACTGGGTCGTGATCAAACTGTTGGAAGACTAGTTTTGAATCTCAAAGCCAATGGAAAGCTTCGTTGGAAGGTCGGAACTTGGGTTTCTGGCCGTTACAGGTTCAATGTTAACTGTGTTGCCATCAATGCCTTTGGACCCTCTGTTCCTTCTGCTCCTCTCATCTCCAACCAAGGGACGCAGTGCTCTACCACACTTTAA 633 0.4676 MSKITITSPKHCGAKEGLKIKSNYKKLYFTLSALFTSILLLILLIWLILHPAKPQFSLKEVDIYQLSLLGPNLNSSIQLTLFSKNPNQKVAIYYDEIQVYATYKGQQITGDTPVPPFYQGQEESNLITASLVGNILPVAPSLGFELGRDQTVGRLVLNLKANGKLRWKVGTWVSGRYRFNVNCVAINAFGPSVPSAPLISNQGTQCSTTL 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02035 210 PANTHER OS05G0367900 PROTEIN 24 194 IPR044839 GO:0098542
Viun9g02035 210 Pfam Late embryogenesis abundant protein 83 183 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02035 Viun-Chr9 30216175 30217090 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g02035 27 183 EF-hand Containing Proteins AT5G21130 27.811 5.33e-08 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02035 - - gmx:100783857 365.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g02035 9 30216175 30217090 Viun9g02035 9 30216175 30217090 ECH