Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01906 ATGGCGAAGCAGAAACTGGGATACACTTTTTTGGTGTACTCGGTGATTCTCTTCTTCTTTGCTTCCTCTGTTTCGGCTTCAGCGAGAGTTGCGCCACTTTTGCAGAGCTATGGGAACCCAATTTTCGGATCAAACTTTCATTCTGTTTACGACACTTCCATGTACGGTGTGTTTCAGCTGAGTAATGGATTGGCTAAAACGCCTCAGATGGGATGGAATAGCTGGAATTTCTTTGCATGCAATATCAGTGAAAAGGTCATTAAGGAAACGGCTGATGCACTGGTATCAACCGGATTGGCTGATTTAGGTTATGTATATGTCAATATAGATGATTGCTGGTCTGCTGTGACAAGAAATCTTAAGGGTCAACTTGTTCCTGATCCTAAGACATTTCCATCTGGAATCAAAGCTCTTGCAGATTATGTCCATGGAAAGGGACTCAAGCTTGGCATATATTCAGATGCTGGGATGTTTACATGTCAAGTCCGGCCAGGATCGATTTTCCATGAAACTGATGATGCAGATTTATTTGCCTCTTGGGGTGTAGACTATTTGAAGTATGACAACTGTTACAACCTGGGTATCCCTCCAAAAGAACGTTATCCTCCTATGCGTGATGCTCTCAATGCAACTGGACGCAAAATTTTCTACTCACTCTGTGAATGGGGAGTTGATAACCCTGCCTTGTGGGCAGACAAGGTAGGCAACAGCTGGCGCACAACCGACGACATCAATGATTCGTGGGCAAGCATGACAACCATTGCCGATCTTAACGATAAGTGGGCTGCATATGCTGGTCCTGGGGGATGGAATGACCCAGATATGTTGGAAGTTGGAAATGGTGGCATGACTTACCAGGAATACCGAGCTCATTTCAGCATTTGGGCTTTAGCGAAGGCACCGCTATTGATCGGGTGTGATGTCAGAAATTTGACTGCTGAAACACTTGAGATTTTAAGCAATGAAGAAGTCATTGCCATTAATCAAGACTCACTTGGAGTCCAGGGAAGGAAAGTTCAAGCTTCTGGTGTAGATGGTTGCAGACAGGTTTGGGCAGGTCCTCTATCAGGAAATCGATTGGTTGTTGCTCTCTGGAATCGGTGCTCAAAAGTTGCCACGATAACAGCTTCATGGGAAGCACTTGGGCTTGAATCTGGCATTCATGTTTCCGTGAGGGATCTGTGGCAGCACAAGTTAGTAGCTGAAGATGCAGTGTCATCGTTCAGTGCTGGAGTTGATATCCACGACTGTAAACTCTACATTTTCACTCCATTTACAGTATCTCACTCTGCAGAGATGGTCTGGTCCCTGCTCATTCATCATGTCTACACAATTTCTGTCCTAAAAGTTCCCTTGAATGGATTTTATATATTTCAGAAACTATGA 1386 0.4437 MAKQKLGYTFLVYSVILFFFASSVSASARVAPLLQSYGNPIFGSNFHSVYDTSMYGVFQLSNGLAKTPQMGWNSWNFFACNISEKVIKETADALVSTGLADLGYVYVNIDDCWSAVTRNLKGQLVPDPKTFPSGIKALADYVHGKGLKLGIYSDAGMFTCQVRPGSIFHETDDADLFASWGVDYLKYDNCYNLGIPPKERYPPMRDALNATGRKIFYSLCEWGVDNPALWADKVGNSWRTTDDINDSWASMTTIADLNDKWAAYAGPGGWNDPDMLEVGNGGMTYQEYRAHFSIWALAKAPLLIGCDVRNLTAETLEILSNEEVIAINQDSLGVQGRKVQASGVDGCRQVWAGPLSGNRLVVALWNRCSKVATITASWEALGLESGIHVSVRDLWQHKLVAEDAVSSFSAGVDIHDCKLYIFTPFTVSHSAEMVWSLLIHHVYTISVLKVPLNGFYIFQKL 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01906 461 SUPERFAMILY Glycosyl hydrolase domain 325 423 - -
Viun9g01906 461 ProSitePatterns Alpha-galactosidase signature. 103 119 IPR000111 GO:0004553|GO:0005975
Viun9g01906 461 PRINTS Glycosyl hydrolase family 27 signature 173 190 IPR002241 GO:0004553|GO:0005975
Viun9g01906 461 PRINTS Glycosyl hydrolase family 27 signature 200 218 IPR002241 GO:0004553|GO:0005975
Viun9g01906 461 PRINTS Glycosyl hydrolase family 27 signature 98 113 IPR002241 GO:0004553|GO:0005975
Viun9g01906 461 PRINTS Glycosyl hydrolase family 27 signature 139 160 IPR002241 GO:0004553|GO:0005975
Viun9g01906 461 PRINTS Glycosyl hydrolase family 27 signature 286 307 IPR002241 GO:0004553|GO:0005975
Viun9g01906 461 PRINTS Glycosyl hydrolase family 27 signature 62 81 IPR002241 GO:0004553|GO:0005975
Viun9g01906 461 PRINTS Glycosyl hydrolase family 27 signature 265 284 IPR002241 GO:0004553|GO:0005975
Viun9g01906 461 PANTHER ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE 14 424 IPR002241 GO:0004553|GO:0005975
Viun9g01906 461 Pfam Alpha galactosidase C-terminal beta sandwich domain 346 421 IPR041233 -
Viun9g01906 461 CDD GH27 68 330 IPR002241 GO:0004553|GO:0005975
Viun9g01906 461 Gene3D - 333 425 IPR013780 -
Viun9g01906 461 Gene3D Aldolase class I 60 332 IPR013785 -
Viun9g01906 461 FunFam Alpha-galactosidase 60 332 - -
Viun9g01906 461 Pfam Alpha galactosidase A 67 330 IPR002241 GO:0004553|GO:0005975
Viun9g01906 461 SUPERFAMILY (Trans)glycosidases 60 330 IPR017853 -
Viun9g01906 461 FunFam Alpha-galactosidase 333 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01906 Viun-Chr9 28988960 28994964 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01906 1 430 Glycoside Hydrolase AT3G56310 72.222 0.0 645
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01906 K07407 - gmx:100784072 809.29