Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01880 ATGGCTCTGGCATTGAACATCTCAGTGGGTTTCCCACACCAGCGTTGCCCCACTCTCTTCAAACCCTCCAGACCAATTCTCTCCTTCCCCACCGCTTCCGCTGTCTCCTCTTTAACGCAACTCAGCGTTTCCGTAGGTGAAGATTTCCCCGACAACTACAGCGATTGGATTCCCAACTCCGACCTTCGCAGAAGATGCGGCATTCTACTCCATCCGACGTCGTTTCGAGGGCCCCACGGCATCGGCGATCTCGGTCACGAGGCCTTCCGTTTCATCGATTGGCTCCACCGCGCCGGTTGCTCCGTTTGGCAGGTTCTTCCTCTCGTGCCGCCTGGCAGAAAAGCCAACGAAGAAGGATCCCCTTACTCTGGCCAGGATGCGAATTGTGGCAACACGCTCTTGATCTCTCTTGAAGGCCTCGTCGACGATGGGCTGTTGGAAAAACACGAGCTTCCAGAACCGATTGATGCAGAGCGCGTCAATTTTTCAGTTGTTGCTGAACTTAAGGATCCTCTGATAACCAAAGCTGCAGAGAGGCTCATTTCAAGTGAAGGAGAACTCAAAACGGAGTTCGAGAATTTCCGAAGAGACCCTGATATATCAAGCTGGCTTGAAGATGCAGCATATTTTGCTGCTATTGATGACAGTTTAAACACATTCAGCTGGTACAATTGGCCTGAGCCTTTAAGAAATCGCCATCTTGTAGCTCTAGAAGACATTTATCAACAGAAACAAGATTTTATAAATGTATTTATTGCCCAACAGTTCTTGTTTCAAAGGCAGTGGCAGAAAGTCCACAGCTATGCACAGAGTAAGGGAATCAGCATAATGGGAGACATGCCAATATATGTTGGTTATCATAGCGCCGATGTTTGGGCAAATAAGAAACAGTTTTTACTGAACCGGAAAGGATTTCCTCTTTTAGTGAGTGGTGTTCCTCCTGATGCATTCAGTGAAACTGGTCAGCTATGGGGCAGCCCCCTATATGATTGGAAAGCCATGGAGAAAGATAGATACTCATGGTGGATTCGTCGCATTCGACGAGCACAAAATCTATTTGATGAATTTAGGATTGACCACTTTAGAGGATTTGCTGGATACTGGGCTGTTCCCGCTGAAGCAAAAGTAGCTATGCTTGGAAAGTGGAAGGTAGGACCTGGGATGTCCTTGTTTGATGCCATTTTCAGAGCTGTTGGAAGGATTAATATAATAGCAGAAGACCTGGGAGTTATCACTGAGGATGTAGTCCAACTAAGAAGATCCATTGGAGCACCTGGAATGGCTGTTCTCCAGTTCGGATTTGGAGGCGATGCTAAGAACCCTCATTTGCCTCATAATCATGAGTGCAATCAAGTTGTCTATACAGGGACTCATGACAATGACACAATCAGAGGCTGGTGGGAAGCTTTGAACCAAGAAGAGAAATCCAAGGCATTAAGTTATCTTTCCTTAAATGAGGGAGATGACATTTCTTGGGGTCTAATCCAGAGAGTATTGGGCTCTGTTTCTCAAACAGCAATAATACCTATGCAAGATGTTCTTGGATTGGGTAATTCTGCCAGGATGAATATTCCCGCAACTCAGTTTGGGAACTGGGGTTGGAGAATTGCAAATTCGGTGAGCTTTGATGGCTTGGAGAGAGAGGCAGACAGACTCAGAGAAATGCTTTCAATGTATGGCCGGCTTTGA 1689 0.4654 MALALNISVGFPHQRCPTLFKPSRPILSFPTASAVSSLTQLSVSVGEDFPDNYSDWIPNSDLRRRCGILLHPTSFRGPHGIGDLGHEAFRFIDWLHRAGCSVWQVLPLVPPGRKANEEGSPYSGQDANCGNTLLISLEGLVDDGLLEKHELPEPIDAERVNFSVVAELKDPLITKAAERLISSEGELKTEFENFRRDPDISSWLEDAAYFAAIDDSLNTFSWYNWPEPLRNRHLVALEDIYQQKQDFINVFIAQQFLFQRQWQKVHSYAQSKGISIMGDMPIYVGYHSADVWANKKQFLLNRKGFPLLVSGVPPDAFSETGQLWGSPLYDWKAMEKDRYSWWIRRIRRAQNLFDEFRIDHFRGFAGYWAVPAEAKVAMLGKWKVGPGMSLFDAIFRAVGRINIIAEDLGVITEDVVQLRRSIGAPGMAVLQFGFGGDAKNPHLPHNHECNQVVYTGTHDNDTIRGWWEALNQEEKSKALSYLSLNEGDDISWGLIQRVLGSVSQTAIIPMQDVLGLGNSARMNIPATQFGNWGWRIANSVSFDGLEREADRLREMLSMYGRL 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01880 562 NCBIfam 4-alpha-glucanotransferase 61 548 IPR003385 GO:0004134|GO:0005975
Viun9g01880 562 Gene3D Glycosidases 61 562 - -
Viun9g01880 562 FunFam 4-alpha-glucanotransferase, chloroplastic/amyloplastic 61 562 - -
Viun9g01880 562 SUPERFAMILY (Trans)glycosidases 60 561 IPR017853 -
Viun9g01880 562 PANTHER 4-ALPHA-GLUCANOTRANSFERASE DPE1, CHLOROPLASTIC/AMYLOPLASTIC 39 562 IPR003385 GO:0004134|GO:0005975
Viun9g01880 562 Pfam 4-alpha-glucanotransferase 70 537 IPR003385 GO:0004134|GO:0005975
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01880 23 562 Glycoside Hydrolase AT5G64860 72.744 0.0 837
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01880 K00705 - gmx:100785271 1055.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g01880 9 28627277 28632781 Viun9g01880 9 28627277 28632781 ECH