Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01876 ATGGAGCAAAGTAAGGAGAAAAATGCTCCCTGGTTATCAGTGCCACAGTTTGGGGACTGGGATCAGAAGGGACAAGTGCCAGACTACTCTCTGGATTTCTCTAAAATTCGGGAAATGAGGAAGCAAAACAAGACAAATATTTCAAGGGCAAGTCTTGGTAATGAAGAGGAACTGATGGCTTCTTCTACCACTAACAATACAAACACTGTCCACAGTGATGAACACCAGCACCAGCACCCTCACTACCACCAAACCAGCTCTCCAACTACAAGGAGGAGCTTCCTGAGCTACTTCAACTGTTGCGTAAAAGCTTGA 315 0.454 MEQSKEKNAPWLSVPQFGDWDQKGQVPDYSLDFSKIREMRKQNKTNISRASLGNEEELMASSTTNNTNTVHSDEHQHQHPHYHQTSSPTTRRSFLSYFNCCVKA 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01876 104 PANTHER PATHOGENIC TYPE III EFFECTOR AVIRULENCE FACTOR AVR AVRRPT-CLEAVAGE: CLEAVAGE SITE PROTEIN 1 103 - -
Viun9g01876 104 MobiDBLite consensus disorder prediction 45 71 - -
Viun9g01876 104 MobiDBLite consensus disorder prediction 42 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01876 Viun-Chr9 28567821 28571083 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01876 - - gmx:100796591 202.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g01876 9 28567821 28571083 Viun9g01876 9 28567821 28571083 ECH