Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01736 ATGAAATTGTGTTTACTTGTGGCGGTGTTGCTGGTCACAGTCACAGTGGTTTCTTGTGGCAATGTGAGCTACGATGGTCGCTCTCTCATCATCGATGGCCAACGCAAGCTTCTTATCTCTGCTTCCATTCATTACCCTCGAAGCGTTCCTGCGATGTGGCCTGGTCTTGTTCAAACAGCGAAGGAAGGAGGGGTAGATGTGATTGAAACCTATGTTTTCTGGAACGGCCATGAGCTTTCTCCTGGCAATTATTACTTTGGAGGAAGGTTTGATCTGGTCAAGTTTGCGAGGACTGTTCATCAAGCAGGGATGTTCTTGATTCTTCGAATAGGCCCATTTGTTGCTGCAGAATGGAATTTTGGTGGTGTACCGGTGTGGTTACATTATGTTCCAGGCACGGTTTTCCGGACTTATAATCAGCCTTTTATGTATCATATGCAGAAGTTTACAACATACATAGTGAACCTTATGAAGCAAGAGAAGCTTTTTGCTTCACAAGGGGGGCCCATAATCTTAGCTCAGATAGAAAATGAATATGGATACTATGAAAATTTTTATAAAGAGGATGGTAAGAAATATGCCTTGTGGGCTGCAAAGATGGCTGTGTCTCAAAATACAGGTGTCCCTTGGATAATGTGCCAACAATGGGATGCTCCAGATCCTGTGATTGATACATGCAATTCATTCTACTGTGACCAATTTAAACCCACTTCTCCAAATAGGCCCAAAATTTGGACTGAGAACTGGCCTGGATGGTTTAAGACTTTCGGGGGCAGAGATCCTCACAGACCAGCAGAAGATGTTGCATTTTCTGTTGCTCGTTTCTTCCAGAAAGGTGGAAGTGTACACAATTACTACATGTATCATGGAGGAACAAATTTTGGGCGAACAGCTGGTGGTCCATTCATTACTACAAGTTATGACTATGATGCGCCGATAGATGAGTATGGGTTACCTAGACTTCCAAAATGGGGACATCTTAAGGAACTTCATAGAGCTATCAAGTTATGCGAGCATGTACTGCTTAATGGGAAACCGGTTAATATCTCCCTTGGTCCTTTTGTGGAGGCTGATGTCTATACTGACTCATCCGGAGCATGCGCTGCCTTTATTTCTAATTCTGATGATAAAAATGATAGAACAGTGGAATTTCGGAATACATCATATCAGTTGCCAGCTTGGTCAGTTAGCATTCTTCCTGATTGCAAGAATGTAGTCTTCAACACAGCGAAGGTTAATTCCCAGACAAATGTAGTTGCAATGATTCCTGGAAGTTTGCAGCATTCAAATAAAGGTGTAAATTCTTTGAGATGGGACATTGTGAAGGAGAAACCAGGAATCTGGGGGACAGCGGACTTTGTCAAAAATGGTTTTGTTGATCTCATCAATACCACCAAAGATACTACTGACTACCTATGGCATACCACAAGTATATTTGTTGGTGAAAATGAAGAGTTCTTGAAAAAGGGAAGCAAACCAGTTCTTCTAATTGAGTCTACAGGTCATGCTCTCCATGCTTTTGTGAATCAGGAATATCAAGGTACTGGTACTGGAAATGGAACACATTCACCATTCACTTTTAAGAATCCCATCTCCCTCCGAGCAGGGAAAAATGAAATTGCTTTGTTGTGCTTGACAGTTGGCTTGCAGACAGCTGGACCCTTTTATGACTTTGTGGGGGCAGGACTCACAAGTGTGAAGATTAAGGGACTGAACAATGGGACAATAGACTTGTCTTCATATGCTTGGACTTACAAGATTGGAGTGCAAGGAGAACACCTAAAGCTATACCAGGGAAATGGGTTGAATAATGTGAGTTGGACATCTACTTCAGAACCACCAAAAATGCAGCCATTGACATGGTACAAGACTATTGTGGATGCTCCACCTGGAGATGAACCAGTTGGGTTGGATATGTTACACATGGGAAAAGGTCTAGCCTGGTTAAATGGAGAGGAAATAGGAAGATATTGGCCCAGAAAAAGTGAATTCAAGAGTGAAGACTGTGTGAAGGAATGTGATTACCGAGGCAAATTTAATCCCGACAAATGTGACACTGGTTGTGGAGAACCAACACAGAGATGGTACCATGTTCCACGATCCTGGTTCAAGCCATCAGGAAATGTTCTTGTTCTTTTTGAGGAGAAAGGTGGAGAACCAGATAAGATTAGGTTTGTGAGACGTAAAATATCTGGAGCATGTGCCCTTGTTTCTGAGGATTACCCCTCCGTTGGACTCCTTTCTCAGGGTGAAGATAAAGTACAGAATAACAAAAACATTCCTTTTGCCCGTTTGACCTGCCCCAGTAACACTCATATATCTGCTGTGAAGTTTGCTAGTTTTGGAACTCCCTCTGGATCATGTGGATCTTACCTCAAGGGAGATTGCCATGATCCCAATTCTAGCACAGTTGTTGAAAAGGCGTGCCTAAACAAAAACGACTGTGTCATAGAATTAACTGAACAGAATTTCAAAACCAACTTGTGTCCTGGTTTAACAAAGAAACTTGCAGTGGAAGCGGTTTGTAGTTGA 2532 0.4242 MKLCLLVAVLLVTVTVVSCGNVSYDGRSLIIDGQRKLLISASIHYPRSVPAMWPGLVQTAKEGGVDVIETYVFWNGHELSPGNYYFGGRFDLVKFARTVHQAGMFLILRIGPFVAAEWNFGGVPVWLHYVPGTVFRTYNQPFMYHMQKFTTYIVNLMKQEKLFASQGGPIILAQIENEYGYYENFYKEDGKKYALWAAKMAVSQNTGVPWIMCQQWDAPDPVIDTCNSFYCDQFKPTSPNRPKIWTENWPGWFKTFGGRDPHRPAEDVAFSVARFFQKGGSVHNYYMYHGGTNFGRTAGGPFITTSYDYDAPIDEYGLPRLPKWGHLKELHRAIKLCEHVLLNGKPVNISLGPFVEADVYTDSSGACAAFISNSDDKNDRTVEFRNTSYQLPAWSVSILPDCKNVVFNTAKVNSQTNVVAMIPGSLQHSNKGVNSLRWDIVKEKPGIWGTADFVKNGFVDLINTTKDTTDYLWHTTSIFVGENEEFLKKGSKPVLLIESTGHALHAFVNQEYQGTGTGNGTHSPFTFKNPISLRAGKNEIALLCLTVGLQTAGPFYDFVGAGLTSVKIKGLNNGTIDLSSYAWTYKIGVQGEHLKLYQGNGLNNVSWTSTSEPPKMQPLTWYKTIVDAPPGDEPVGLDMLHMGKGLAWLNGEEIGRYWPRKSEFKSEDCVKECDYRGKFNPDKCDTGCGEPTQRWYHVPRSWFKPSGNVLVLFEEKGGEPDKIRFVRRKISGACALVSEDYPSVGLLSQGEDKVQNNKNIPFARLTCPSNTHISAVKFASFGTPSGSCGSYLKGDCHDPNSSTVVEKACLNKNDCVIELTEQNFKTNLCPGLTKKLAVEAVCS 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01736 843 Pfam Galactose binding lectin domain 765 842 IPR000922 GO:0030246
Viun9g01736 843 SUPERFAMILY (Trans)glycosidases 22 338 IPR017853 -
Viun9g01736 843 CDD Gal_Rha_Lectin_BGal 761 842 - -
Viun9g01736 843 Pfam Glycosyl hydrolases family 35 28 333 IPR031330 -
Viun9g01736 843 Gene3D Glycosidases 20 337 - -
Viun9g01736 843 SUPERFAMILY Galactose-binding domain-like 583 735 IPR008979 -
Viun9g01736 843 FunFam Beta-galactosidase 286 414 - -
Viun9g01736 843 Gene3D - 592 734 - -
Viun9g01736 843 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 167 179 IPR019801 GO:0004553|GO:0005975
Viun9g01736 843 PRINTS Glycosyl hydrolase family 35 signature 281 296 IPR001944 GO:0004553|GO:0005975
Viun9g01736 843 PRINTS Glycosyl hydrolase family 35 signature 165 180 IPR001944 GO:0004553|GO:0005975
Viun9g01736 843 PRINTS Glycosyl hydrolase family 35 signature 53 71 IPR001944 GO:0004553|GO:0005975
Viun9g01736 843 PRINTS Glycosyl hydrolase family 35 signature 108 127 IPR001944 GO:0004553|GO:0005975
Viun9g01736 843 PRINTS Glycosyl hydrolase family 35 signature 644 660 IPR001944 GO:0004553|GO:0005975
Viun9g01736 843 PRINTS Glycosyl hydrolase family 35 signature 301 317 IPR001944 GO:0004553|GO:0005975
Viun9g01736 843 PRINTS Glycosyl hydrolase family 35 signature 32 49 IPR001944 GO:0004553|GO:0005975
Viun9g01736 843 PRINTS Glycosyl hydrolase family 35 signature 617 631 IPR001944 GO:0004553|GO:0005975
Viun9g01736 843 PRINTS Glycosyl hydrolase family 35 signature 244 259 IPR001944 GO:0004553|GO:0005975
Viun9g01736 843 ProSiteProfiles SUEL-type lectin domain profile. 761 843 IPR000922 GO:0030246
Viun9g01736 843 FunFam Beta-galactosidase 578 669 - -
Viun9g01736 843 SUPERFAMILY Galactose-binding domain-like 396 549 IPR008979 -
Viun9g01736 843 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Viun9g01736 843 PANTHER BETA-GALACTOSIDASE RELATED 12 744 IPR001944 GO:0004553|GO:0005975
Viun9g01736 843 Pfam Beta-sandwich domain in beta galactosidase 341 412 IPR041392 -
Viun9g01736 843 Gene3D - 752 843 IPR043159 -
Viun9g01736 843 FunFam Beta-galactosidase 754 843 - -
Viun9g01736 843 FunFam Beta-galactosidase 18 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01736 Viun-Chr9 26400194 26407814 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01736 5 731 Glycoside Hydrolase AT5G63810 70.919 0.0 1113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01736 - - gmx:100815037 1678.69