Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01666 ATGAATTCCTTCCGCGGATCACAAAACCGAAACAAACACGCACCAATCCCGCGTCAACCCGGATCCACCACCGATGACAAACCCATGGATCCGCCGGCAGGGCCGCCCGCATTGCGCTTCCGCTCCCTCTCAAACTGCGGCCACAGCCGCCCCTCCGCCTCCCGCGTAGTGCAGCGCTCCGCCTCCGCGCGCATGACCCGCCAGCACACCACCACACGCGGCGAGGTAATGCTCAGCGACGTCGTCGGGAACGGCATCTCCGGCATCCTTCACAAGTGGGTGAACTACGGGCGCGGGTGGCGCCCCCGCTGGTTCGTCCTCCACGACGGCGTGCTCTCCTACTACAAGATCCACGGCCCCGACAAGCTAGTCCTCAACCACGACGTCGAGGACGGCTCCATGGTCATCGGCGAGGAATCCCTCCGCCGCATCAACAGCCACCGTCACTGCCCCTCCCGCCACCGCAAACCCGTCAGCGAAATCCATCTCATGGTGTGTTCGGTGCAAGAGAACAGTTCAGATAAGAGGAGGTTTTCTGTGTGTACGGGGACGAAGAAGAGACTGCATTTGAGGGCGGAGAGTAAGGAAGATAGAACAATGTGGGTGGAGGCAATGATGGCAGTGAAGGACATGTATCCTCGGTTGCCCAATGCAGAGGTTTTGTCTCCCGTGGCATCAGTGGCTATTTCCACTGAAAAATTGAGAGAGAGGCTTTTAGAAGAGGGTTTGAGTGATGCTACAATCGGGGAATGTGAGGAAATCATGAAATTCGAGTTCTCTCAGTTGAAGAAGCAAATGGTGGCTCTCAAGCACAAGCATTTGCTACTAGTGGACACGTTACGCCAGTTAGAGTCAGAGAAAGTTGATTTGGAGAACACACTTATCGAAGACCAAAGGCAATCAAAGGATGGAGCAGATACTCATCCATTAATGCTAGAAAAATATAGCGGTACTGGGGAAGATTCTTCTGATGAGCACGATAGGATGGATCCTTCAGACGATGACGACGATGCATTCTTTGATACATGTGAAATTCTATCAACAGGCTCTGATCACCTGAGATCGTGCCATGATTCTGAGCAGGATGAGACTGGTCCAAATGAGATATGTGATGAAAAGTCACCCATTGGATCTGTTGGATTTAACTATCCTCATATCAAGCGACGAAAGAAGTTGCCCGATCCTGTTGAGAAAGAAAGTAGCGTCAGTCTATGGTCAATCATAAAAGATAATATCGGGAAGGATCTTACAAAAGTTTGTCTTCCAGTTTACTTTAACGAGCCTCTCTCCTCACTACAGAAATGTTTTGAAGATGTTGAGTACTCTTACCTTCTAGACCAAGCATATGAATGGGGTAAAATGGGTGATGGTTTGAAGAGGATGATACATGTAGCTGGATTTGCAGCTTCGGCATATGCTAGCACCAAAGGTAGAAGTTGCAAACCATTTAATCCACTGTTGGGAGAGACATATGAAGCAGATTACCCAGACAAAGGCATTCACTTTATCTCTGAGAAGGTCAGTCATCACCCCATGATTGTAGCATGCCATTGTGAGGGCAGGGGCTGGAAATTTTGGGGTGACGTCAATTTAAAAAGTAAATTTTGGGGTCGTTCAATCCAGCTTGATCCTATTGGTGTATTGACAGTGGAGTTTGATGATGGAGAAACCATTCATTGGAGCAAGGTAACAACATCTATTTACAACCTCATTTTAGGAAAACTCTACTGCGACCATTATGGTACAATGCGCCTAGAGGGGAACAGTAACTATGTATGTAAGATCAAATTCAAGGAGCAGTCAATCATTGATAGGAACCCTCACCAGATTCACGGCATAGTGGAGGATAAGAAAGGTAAAACAGTGGCAACTCTAATTGGGAAGTGGGATGAGAGTTTGCACTACGTAATTGGAGGGAGTTTTGGGAAAGGAAAAGGGTCCAATGAGTCATCAAAACCACATTTTCTGTGGAAGAAGAACCCGCCACCAGAGCACCAGACAAGATATAACTTCACACAATTTGCTATTACACTCAATGAAATCACACCTGGACTAAAGGAGAAGTTGCCACCGACAGATTCAAGGCTAAGACCTGATCAAAGGTGTTTGGAGAATGGACAGTATGAAATGGCCAATTCTGAAAAGTTGCGGCTGGAACAAAGACAGCGACAGGCACGAAAGATGCAAGAAAAGGGTTGGAAACCAAGGTGGTTTGCTAAGGAAAAAGGCAGCATCTCTTACCGTTATATTGGAGGGTACTGGGAGAGTAGGGAAAAGGGGAACTGGGAATCCTGTCCTGACATTTTTGGTCAATTCTCAACCGATACTGATGCTACCCCAACTCCATAA 2349 0.4785 MNSFRGSQNRNKHAPIPRQPGSTTDDKPMDPPAGPPALRFRSLSNCGHSRPSASRVVQRSASARMTRQHTTTRGEVMLSDVVGNGISGILHKWVNYGRGWRPRWFVLHDGVLSYYKIHGPDKLVLNHDVEDGSMVIGEESLRRINSHRHCPSRHRKPVSEIHLMVCSVQENSSDKRRFSVCTGTKKRLHLRAESKEDRTMWVEAMMAVKDMYPRLPNAEVLSPVASVAISTEKLRERLLEEGLSDATIGECEEIMKFEFSQLKKQMVALKHKHLLLVDTLRQLESEKVDLENTLIEDQRQSKDGADTHPLMLEKYSGTGEDSSDEHDRMDPSDDDDDAFFDTCEILSTGSDHLRSCHDSEQDETGPNEICDEKSPIGSVGFNYPHIKRRKKLPDPVEKESSVSLWSIIKDNIGKDLTKVCLPVYFNEPLSSLQKCFEDVEYSYLLDQAYEWGKMGDGLKRMIHVAGFAASAYASTKGRSCKPFNPLLGETYEADYPDKGIHFISEKVSHHPMIVACHCEGRGWKFWGDVNLKSKFWGRSIQLDPIGVLTVEFDDGETIHWSKVTTSIYNLILGKLYCDHYGTMRLEGNSNYVCKIKFKEQSIIDRNPHQIHGIVEDKKGKTVATLIGKWDESLHYVIGGSFGKGKGSNESSKPHFLWKKNPPPEHQTRYNFTQFAITLNEITPGLKEKLPPTDSRLRPDQRCLENGQYEMANSEKLRLEQRQRQARKMQEKGWKPRWFAKEKGSISYRYIGGYWESREKGNWESCPDIFGQFSTDTDATPTP 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01666 782 Gene3D - 489 668 - -
Viun9g01666 782 MobiDBLite consensus disorder prediction 352 369 - -
Viun9g01666 782 MobiDBLite consensus disorder prediction 1 69 - -
Viun9g01666 782 FunFam Oxysterol-binding protein-related protein 2A 700 771 - -
Viun9g01666 782 ProSiteProfiles PH domain profile. 83 210 IPR001849 -
Viun9g01666 782 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 85 757 IPR000648 GO:0008289
Viun9g01666 782 FunFam oxysterol-binding protein-related protein 1D isoform X1 489 661 - -
Viun9g01666 782 SUPERFAMILY Oxysterol-binding protein-like 398 771 IPR037239 -
Viun9g01666 782 SUPERFAMILY PH domain-like 86 217 - -
Viun9g01666 782 Gene3D - 700 764 - -
Viun9g01666 782 Gene3D - 84 212 IPR011993 -
Viun9g01666 782 MobiDBLite consensus disorder prediction 352 373 - -
Viun9g01666 782 SMART PH_update 84 212 IPR001849 -
Viun9g01666 782 MobiDBLite consensus disorder prediction 299 334 - -
Viun9g01666 782 Coils Coil 280 300 - -
Viun9g01666 782 Pfam PH domain 86 206 IPR001849 -
Viun9g01666 782 Coils Coil 708 731 - -
Viun9g01666 782 MobiDBLite consensus disorder prediction 1 18 - -
Viun9g01666 782 MobiDBLite consensus disorder prediction 45 69 - -
Viun9g01666 782 Pfam Oxysterol-binding protein 403 758 IPR000648 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01666 Viun-Chr9 25164927 25171736 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01666 K20456 - gmx:100807703 1258.43